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See other TCF25 CNV Assays ›
Gene Symbol
TCF25
Assay Reference Genome
Location

Chr.16:89898219 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03953790_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 22980

Gene Name:

 transcription factor 25

Gene Aliases:

 FKSG26, Hulp1, NULP1, PRO2620, hKIAA1049

Location:

 Chr.16:89873583-89911384 on Build GRCh38

Assay Gene Location:

 Within Intron 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TCF25 NM_014972.2 NP_055787.1
XM_005256297.2 XP_005256354.1
XM_005256298.2 XP_005256355.1
XM_005256299.2 XP_005256356.1
XM_011522956.2 XP_011521258.1
XM_011522957.2 XP_011521259.1
XM_011522958.2 XP_011521260.1
XM_011522959.2 XP_011521261.1
XM_011522960.2 XP_011521262.1
XM_011522961.2 XP_011521263.1
XM_017023047.1 XP_016878536.1
XM_017023048.1 XP_016878537.1
XM_017023049.1 XP_016878538.1
XM_017023050.1 XP_016878539.1
XM_017023051.1 XP_016878540.1
XM_017023052.1 XP_016878541.1
XM_017023053.1 XP_016878542.1
XM_017023054.1 XP_016878543.1
XM_017023055.1 XP_016878544.1
XM_017023056.1 XP_016878545.1
XM_017023057.1 XP_016878546.1
XM_017023058.1 XP_016878547.1
AB028972.1 BAA83001.1
AF130092.1 AAG35518.1
AF322111.1 AAG50276.1
BC000959.1 AAH00959.1
BC009349.2 AAH09349.1
BC011884.2 AAH11884.1
DQ321703.1 ABC55265.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv573744 Chr.16:89738447 - 89915950 on Build GRCh38 Loss ZNF276 LOC107984817 SPIRE2 FANCA TCF25 LOC105371419
esv2758671 Chr.16:89804324 - 89901541 on Build GRCh38 Loss LOC107984817 SPIRE2 FANCA TCF25 LOC105371419
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss ZNF276 DPEP1 LOC107984817 SPATA2L SPATA33 FANCA DEF8 DBNDD1 CDK10 GAS8 SPIRE2 VPS9D1 VPS9D1-AS1 CENPBD1 MC1R TCF25 CHMP1A AFG3L1P TUBB3 GAS8-AS1 LOC105371419
nsv573810 Chr.16:89857498 - 90037251 on Build GRCh38 Loss GAS8 SPIRE2 CENPBD1 MC1R DEF8 DBNDD1 TCF25 AFG3L1P TUBB3 GAS8-AS1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss ZNF276 ANKRD11 DPEP1 SNORD68 SPG7 FAM157C URAHP DBNDD1 LOC105371414 CDK10 PRDM7 MC1R AFG3L1P LOC101927817 LOC105371419 LOC107984817 SPATA2L SPATA33 TUBB8P7 FANCA DEF8 ZNF778 GAS8 LOC100287036 SPIRE2 CPNE7 VPS9D1 RPL13 VPS9D1-AS1 CENPBD1 TCF25 CHMP1A TUBB3 GAS8-AS1
nsv573799 Chr.16:89852186 - 90022379 on Build GRCh38 Gain GAS8 SPIRE2 CENPBD1 MC1R DEF8 DBNDD1 TCF25 AFG3L1P TUBB3 LOC105371419
nsv1066499 Chr.16:89891957 - 90028891 on Build GRCh38 Loss GAS8 CENPBD1 MC1R DEF8 DBNDD1 TCF25 AFG3L1P TUBB3
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss RNF166 DPEP1 SNORD68 SPG7 MIR4722 LOC339059 CDK10 PRDM7 TRAPPC2L MC1R SNAI3-AS1 LOC101927817 LOC107984817 SLC22A31 TUBB8P7 LOC107987238 FANCA CBFA2T3 ZNF778 GAS8 LOC100287036 CDT1 SPIRE2 CPNE7 VPS9D1 PABPN1L VPS9D1-AS1 CENPBD1 TUBB3 GAS8-AS1 ZNF276 ANKRD11 MVD LOC101927793 FAM157C LOC100129697 ACSF3 URAHP DBNDD1 LOC105371414 IL17C CYBA LINC00304 AFG3L1P LOC105371419 SPATA2L LOC105371409 GALNS SPATA33 APRT LOC100289580 CDH15 DEF8 SNAI3 RPL13 PIEZO1 TCF25 CHMP1A LOC400558 CTU2

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