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See other AXIN1 CNV Assays ›
Gene Symbol
AXIN1
Assay Reference Genome
Location

Chr.16:290352 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03954394_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8312

Gene Name:

 axin 1

Gene Aliases:

 AXIN, PPP1R49

Location:

 Chr.16:287440-355226 on Build GRCh38

Assay Gene Location:

 Within Intron 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AXIN1 NM_003502.3 NP_003493.1
NM_181050.2 NP_851393.1
NR_134879.1
XM_011522682.2 XP_011520984.1
XM_011522683.2 XP_011520985.1
XM_011522684.2 XP_011520986.1
XM_011522686.1 XP_011520988.1
XM_017023743.1 XP_016879232.1
XM_017023744.1 XP_016879233.1
XM_017023745.1 XP_016879234.1
XM_017023746.1 XP_016879235.1
AB208876.1 7 4619 BAD92113.1
AF009674.1 AAC51624.1
BC017447.1 AAH17447.1
BC044648.1 AAH44648.1
BX648449.1 1 67
KF615847.1
KF615848.1
KF615849.1
KF615850.1
KF615851.1
KF615852.1
KF615853.1
KF615854.1
KU178413.1
KU178414.1
KU178415.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication CHTF18 NDUFB10 LOC101929280 LMF1-AS1 RPL3L SNHG19 LINC00254 RNF151 PDIA2 HAGHL E4F1 LOC105371046 MIR940 C16orf59 GNPTG SNORD60 LOC729652 MIR6511B1 RPS2 LOC105371038 FLJ42627 RAB26 CACNA1H C1QTNF8 PRR35 ZNF598 ABCA3 HBZ SSTR5-AS1 NARFL SSTR5 METTL26 MCRIP2 TPSAB1 BRICD5 LOC100134368 LOC105371049 HBM MIR3178 NHLRC4 MIR3180-5 CRAMP1 GFER UBE2I SPSB3 LOC100287175 HBQ1 PRSS29P MIR3176 RPL23AP5 RHBDF1 KCTD5 PRSS27 RAB11FIP3 LOC107987233 IGFALS HN1L RGS11 MIR662 FAM234A MLST8 DDX11L10 SLC9A3R2 HBA2 SNORA78 SNRNP25 TELO2 CCDC78 SYNGR3 MIR1225 MIR6768 MIR3177 NPW MSRB1 CASKIN1 LMF1 NTN3 WDR90 MIR4516 LOC106660606 MIR3677 MSLN PIGQ TPSG1 ATP6V0C TBC1D24 AXIN1 MPG DNASE1L2 NME3 NUBP2 RPUSD1 CEMP1 NOXO1 UNKL PKD1 FAM173A SNORA10 MIR6859-4 AMDHD2 MIR5587 PRR25 MIR6767 GNG13 SOX8 WASIR2 HS3ST6 CCNF EME2 ERVK13-1 TSR3 TSC2 FAHD1 SNHG9 BAIAP3 RNPS1 TBL3 LINC00235 NTHL1 LOC652276 TMEM204 CLCN7 ECI1 ABCA17P NPRL3 CAPN15 C16orf91 MIR4717 TPSB2 MRPL28 LOC105371184 RHOT2 LOC105371045 CCDC154 PGP RAB40C IFT140 MEIOB SNORA64 STUB1 HBA1 FBXL16 TPSD1 HAGH NME4 LOC107984876 ARHGDIG METRN DECR2 TMEM8A WFIKKN1 POLR3K PTX4 MRPS34 RHBDL1 JMJD8 LUC7L MAPK8IP3 WDR24 LOC105371047 PDPK1 TRAF7
esv3637564 Chr.16:287941 - 370218 on Build GRCh38 Gain MRPL28 AXIN1
nsv952896 Chr.16:273501 - 321500 on Build GRCh38 Deletion ARHGDIG PDIA2 RGS11 AXIN1
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain ARHGDIG PDIA2 DECR2 RGS11 MRPL28 RPL23AP5 FAM234A TMEM8A RAB11FIP3 LOC100134368 AXIN1 NME4
nsv570951 Chr.16:279671 - 322597 on Build GRCh38 Loss ARHGDIG PDIA2 AXIN1
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain ARHGDIG PDIA2 RGS11 FAM234A AXIN1
nsv570947 Chr.16:272935 - 297326 on Build GRCh38 Loss ARHGDIG PDIA2 RGS11 AXIN1
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss ARHGDIG PDIA2 DECR2 RGS11 MRPL28 RPL23AP5 FAM234A TMEM8A RAB11FIP3 LOC100134368 AXIN1 NME4

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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