Genomic Map
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Target Gene Details
Entrez Gene ID: | 3978 |
Gene Name: | DNA ligase 1 |
Gene Aliases: |
- |
Location: |
Chr.19:48115445-48170603 on Build GRCh38 |
Assay Gene Location: | Within Intron 26 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| LIG1 | NM_000234.2 | NP_000225.1 | ||
| NM_001289063.1 | NP_001275992.1 | |||
| NM_001289064.1 | NP_001275993.1 | |||
| NM_001320970.1 | NP_001307899.1 | |||
| NM_001320971.1 | NP_001307900.1 | |||
| NR_110296.1 | ||||
| NR_135497.1 | ||||
| NR_135498.1 | ||||
| NR_135499.1 | ||||
| NR_135500.1 | ||||
| NR_135501.1 | ||||
| XM_017026809.1 | XP_016882298.1 | |||
| AB208791.1 | BAD92028.1 | |||
| AK225863.1 | ||||
| AK297296.1 | ||||
| AK300370.1 | ||||
| AK300607.1 | ||||
| AK314210.1 | ||||
| BC108318.1 | AAI08319.1 | |||
| BC110622.2 | AAI10623.1 | |||
| M36067.1 | AAA59518.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv833853 | Chr.19:47982539 - 48184317 on Build GRCh38 | Loss |
 C19orf68
PLA2G4C-AS1
ELSPBP1
CABP5
BSPH1
LIG1
PLA2G4C
|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
MAMSTR
FAM83E
SNAR-G2
RASIP1
FLT3LG
PPP1R15A
SNAR-G1
GRWD1
RRAS
ALDH16A1
SCAF1
SNAR-A6
SNAR-A5
CGB3
PRMT1
TSKS
SNAR-C1
CGB5
DBP
TULP2
NUCB1
NUCB1-AS1
LIG1
GFY
SNAR-C3
ELSPBP1
LHB
MIR150
MIR6800
SNAR-C2
FTL
GRIN2D
CA11
FUT2
CARD8-AS1
AKT1S1
ZNF114
HRC
PTOV1-AS1
PTOV1-AS2
BCL2L12
SNAR-A10
TBC1D17
SNAR-D
SNORD34
SNAR-A11
PLA2G4C-AS1
FLJ26850
PRR12
PNKP
SNAR-A1
MIR5088
VRK3
LOC101059948
SYNGR4
FCGRT
KDELR1
SNORD35A
SNAR-C4
PTOV1
SNAR-A9
FUZ
CPT1C
C19orf68
RCN3
C19orf73
SNAR-A14
SLC17A7
PLEKHA4
DKKL1
HSD17B14
AP2A1
IRF3
SLC6A16
CGB1
CYTH2
IL4I1
CABP5
CCDC114
RPS11
MIR4751
LMTK3
NTF4
LOC105372430
SNAR-A4
TRPM4
SNAR-A2
PLA2G4C
PTH2
RPL18
ADM5
SPACA4
PPFIA3
MED25
SNORD33
CD37
EMP3
SNORD35B
ATF5
SNAR-A3
SNAR-B2
SNAR-A8
CGB7
FGF21
FUT1
RUVBL2
LOC105447645
CARD8
LIN7B
TEAD2
PRRG2
SEC1P
SNAR-A12
CGB2
PIH1D1
ZNF473
SNORD32A
NUP62
MIR6799
LOC101928295
CCDC155
SPHK2
IZUMO1
NOSIP
SNAR-A7
RPL13A
SIGLEC16
SNAR-B1
GYS1
BSPH1
SNRNP70
DHDH
KCNJ14
SNAR-C5
SIGLEC11
CGB8
LOC100287477
BCAT2
MIR4324
MIR4750
TMEM143
NTN5
SULT2B1
KCNA7
BAX
MIR6798
MIR4749
SNAR-A13
|
| esv34181 | Chr.19:48009377 - 48416682 on Build GRCh38 | Loss |
CARD8-AS1
CARD8
SYNGR4
CABP5
ZNF114
CCDC114
LIG1
EMP3
KDELR1
C19orf68
TMEM143
PLA2G4C-AS1
ELSPBP1
PLA2G4C
GRIN2D
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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