Hs04010546_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48038422 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	BSPH1 C19orf68 CABP5 PLA2G4C-AS1 PLA2G4C LIG1 ELSPBP1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	DBP FUT2 GYS1 ATF5 LOC105447645 TEAD2 RPS11 SNAR-B2 PTOV1 SNAR-A13 FCGRT NTF4 EMP3 MIR4749 IRF3 RASIP1 KCNA7 LIG1 SULT2B1 LHB SYNGR4 SNAR-C1 BCL2L12 SNAR-A1 SLC17A7 SNAR-B1 FGF21 LOC100287477 AP2A1 BAX C19orf73 MAMSTR PPFIA3 CCDC155 SNORD35A TBC1D17 GRWD1 SNAR-A4 RPL18 TRPM4 NOSIP CARD8-AS1 SPACA4 SNAR-C4 NUP62 NTN5 PTOV1-AS1 CGB7 ADM5 GFY SNAR-A9 CABP5 PLA2G4C SPHK2 PRMT1 SNAR-A11 LMTK3 MIR150 PNKP PPP1R15A CYTH2 NUCB1 MIR6798 LOC101928295 ZNF114 ALDH16A1 SNAR-A2 MIR6800 RCN3 PRRG2 SNAR-G2 SIGLEC16 SNAR-A8 SNORD34 SNAR-A5 CGB5 MIR4750 SNAR-G1 LOC105372430 SNAR-D TMEM143 CCDC114 DHDH SNAR-A12 MIR4324 AKT1S1 PTOV1-AS2 BSPH1 C19orf68 SNAR-C5 SNAR-C3 KCNJ14 SNAR-A7 FLT3LG SEC1P NUCB1-AS1 HSD17B14 FLJ26850 FAM83E CGB2 FTL SNRNP70 MIR6799 SNORD35B LOC101059948 FUZ PRR12 CGB8 CPT1C HRC GRIN2D LIN7B MIR4751 CA11 MED25 SNAR-A10 SNORD32A SLC6A16 TULP2 SNORD33 SNAR-C2 PIH1D1 SNAR-A6 DKKL1 VRK3 PLA2G4C-AS1 ELSPBP1 SIGLEC11 CGB3 CGB1 KDELR1 RUVBL2 PTH2 SNAR-A3 SCAF1 TSKS ZNF473 FUT1 CD37 BCAT2 PLEKHA4 CARD8 RPL13A SNAR-A14 IL4I1 MIR5088 RRAS IZUMO1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CARD8-AS1 GRIN2D KDELR1 C19orf68 ZNF114 EMP3 TMEM143 CCDC114 CARD8 CABP5 PLA2G4C-AS1 PLA2G4C LIG1 SYNGR4 ELSPBP1
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	CABP5 PLA2G4C-AS1 PLA2G4C ELSPBP1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	CABP5 PLA2G4C-AS1 PLA2G4C ELSPBP1
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	CRX SNAR-C1 BSPH1 SNAR-A1 SNAR-C5 SNAR-C3 SNAR-C4 SNAR-A3 SNAR-C2 SNAR-A13 LINC01595 SNAR-A2 CABP5 SNAR-A12 TPRX1 ELSPBP1 SULT2A1
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	CABP5 PLA2G4C-AS1 PLA2G4C ELSPBP1
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	CRX SNAR-C1 BSPH1 SNAR-A1 SNAR-C5 SNAR-C3 SNAR-C4 SNAR-A3 SNAR-C2 SNAR-A13 LINC01595 SNAR-A2 CABP5 SNAR-A12 PLA2G4C-AS1 PLA2G4C TPRX1 ELSPBP1 SULT2A1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding