Hs04010546_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48038422 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	C19orf68 LIG1 PLA2G4C ELSPBP1 PLA2G4C-AS1 BSPH1 CABP5
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SNAR-A3 NUCB1-AS1 SPACA4 KCNJ14 NOSIP SNAR-A11 CPT1C TMEM143 BAX LMTK3 ALDH16A1 TSKS SNAR-C4 PLA2G4C LOC101928295 CGB2 SULT2B1 IRF3 VRK3 FUT1 SNAR-A2 PLEKHA4 TBC1D17 SNAR-A14 TRPM4 CARD8 SNAR-A5 RASIP1 SNORD33 C19orf68 SNORD32A LOC101059948 SNAR-G2 SNAR-A7 IL4I1 MIR4750 SPHK2 NUP62 CGB3 MIR150 SNORD35A SNORD35B SNAR-C3 C19orf73 SNAR-A9 CCDC114 FLJ26850 PRMT1 NTN5 PPP1R15A SNAR-A12 MIR4324 MAMSTR RPS11 LIN7B DBP FGF21 SNAR-A6 SLC6A16 SNAR-B1 TEAD2 FLT3LG GRWD1 SIGLEC16 LHB TULP2 FAM83E LOC105447645 FTL SNAR-A8 MIR4749 LIG1 AP2A1 GYS1 DHDH PTOV1 HRC MIR4751 MED25 SNAR-A4 SNAR-A10 DKKL1 SNRNP70 CCDC155 CGB5 LOC105372430 CGB1 PRRG2 CGB7 AKT1S1 CGB8 FUZ ATF5 PPFIA3 FCGRT SNAR-D ZNF473 SCAF1 RPL13A PTOV1-AS2 MIR6799 CA11 SIGLEC11 PNKP KDELR1 BSPH1 HSD17B14 PTOV1-AS1 MIR6798 SNAR-B2 ELSPBP1 RCN3 PLA2G4C-AS1 GFY NUCB1 SNAR-C5 SNORD34 SNAR-A13 SEC1P RUVBL2 RPL18 CABP5 CARD8-AS1 CYTH2 ZNF114 MIR5088 ADM5 LOC100287477 MIR6800 BCL2L12 CD37 RRAS SNAR-G1 EMP3 GRIN2D SLC17A7 KCNA7 PTH2 SNAR-A1 PRR12 IZUMO1 SNAR-C1 SNAR-C2 BCAT2 PIH1D1 NTF4 SYNGR4 FUT2
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	PLA2G4C ELSPBP1 PLA2G4C-AS1 CABP5
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	LIG1 ELSPBP1 PLA2G4C-AS1 TMEM143 CARD8 EMP3 GRIN2D C19orf68 PLA2G4C KDELR1 CCDC114 CABP5 CARD8-AS1 ZNF114 SYNGR4
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C ELSPBP1 PLA2G4C-AS1 CABP5
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	SNAR-A3 SNAR-A12 SNAR-A2 ELSPBP1 TPRX1 SNAR-C5 LINC01595 SNAR-C4 SNAR-C3 SULT2A1 SNAR-A1 SNAR-A13 CRX SNAR-C1 SNAR-C2 BSPH1 CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C ELSPBP1 PLA2G4C-AS1 CABP5
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-A3 SNAR-A12 SNAR-A2 ELSPBP1 TPRX1 PLA2G4C-AS1 SNAR-C5 LINC01595 SNAR-C4 SNAR-C3 SULT2A1 SNAR-A1 PLA2G4C SNAR-A13 CRX SNAR-C1 SNAR-C2 BSPH1 CABP5

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding