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See other PTOV1 CNV Assays ›
Gene Symbol
PTOV1
Assay Reference Genome
Location

Chr.19:49856061 on build GRCh38
Cytoband
19q13.33
Assay ID Hs04013365_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 53635

Gene Name:

 prostate tumor overexpressed 1

Gene Aliases:

 ACID2, PTOV-1

Location:

 Chr.19:49850726-49860744 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PTOV1 NM_001305105.1 NP_001292034.1
NM_001305108.1 NP_001292037.1
NM_017432.4 NP_059128.2
NR_130963.1
XM_005258998.4 XP_005259055.1
XM_006723244.3 XP_006723307.1
XM_011527033.1 XP_011525335.1
XM_011527034.2 XP_011525336.1
XM_011527035.1 XP_011525337.1
XM_017026879.1 XP_016882368.1
XM_017026880.1 XP_016882369.1
AJ617480.1 CAE84582.1
AK057817.1
AY358168.1 AAQ88535.1
U79287.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss ELSPBP1 LOC101059948 BCL2L12 SNAR-D SNAR-C3 KDELR1 FUT2 SNAR-G1 NTN5 TBC1D17 PIH1D1 SNAR-A12 CGB3 FTL SLC6A16 CD37 CGB2 RPL18 MED25 SNAR-C5 MIR4751 DBP FLJ26850 BSPH1 MIR4749 C19orf73 SNORD33 PTOV1 LOC105447645 GRWD1 CYTH2 SEC1P SNAR-A5 CABP5 KCNA7 TMEM143 BCAT2 IZUMO1 PTOV1-AS2 NTF4 SNAR-C4 PLA2G4C TEAD2 SNORD35B SIGLEC11 CA11 ATF5 SCAF1 SPHK2 SNAR-A1 FAM83E GYS1 LIG1 AP2A1 NUCB1-AS1 ZNF114 SNAR-A9 MIR6798 LOC105372430 SIGLEC16 DHDH PPFIA3 ADM5 SNAR-A2 SNAR-A3 RPL13A SLC17A7 SNRNP70 PNKP ALDH16A1 MIR6799 CARD8-AS1 SNAR-B2 BAX PRRG2 VRK3 TSKS PTH2 CGB5 LOC101928295 DKKL1 CGB8 LHB FUZ PRR12 SNAR-A8 RASIP1 GRIN2D SNAR-A14 MAMSTR FLT3LG KCNJ14 CGB1 SNORD35A PLEKHA4 MIR4324 IRF3 MIR6800 CCDC114 HSD17B14 AKT1S1 NUCB1 IL4I1 FUT1 MIR150 TULP2 SPACA4 SNAR-A7 SNAR-C2 SNAR-C1 TRPM4 PRMT1 LOC100287477 MIR4750 SNAR-A13 PPP1R15A FCGRT CARD8 LIN7B SNORD34 ZNF473 SNAR-A6 SYNGR4 SNAR-G2 SNAR-A4 SNAR-B1 PLA2G4C-AS1 C19orf68 SNAR-A11 SNORD32A EMP3 PTOV1-AS1 RRAS RPS11 SULT2B1 CCDC155 NOSIP LMTK3 RCN3 HRC MIR5088 CGB7 GFY FGF21 NUP62 RUVBL2 CPT1C SNAR-A10
nsv470150 Chr.19:49618821 - 49856789 on Build GRCh38 Gain PTOV1-AS2 AP2A1 MIR6799 MED25 BCL2L12 PTOV1-AS1 RRAS MIR4749 PRMT1 IRF3 PTOV1 TSKS MIR6800 MIR5088 ADM5 SCAF1 FUZ CPT1C PRR12
nsv524068 Chr.19:49853907 - 49897791 on Build GRCh38 Loss PNKP PTOV1 PTOV1-AS2 TBC1D17 AKT1S1 MIR4749 IL4I1 MIR4750
dgv53n68 Chr.19:49724393 - 49943224 on Build GRCh38 Loss PNKP PTOV1-AS2 AP2A1 MIR6799 MED25 MIR4751 PTOV1-AS1 MIR4749 MIR4750 ATF5 PTOV1 TSKS MIR6800 TBC1D17 AKT1S1 NUP62 IL4I1 FUZ
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion PNKP PTOV1-AS2 MIR6799 BCL2L12 PRMT1 PRRG2 MIR4750 ATF5 TSKS SCAF1 TBC1D17 FUZ PRR12 AP2A1 MED25 MIR4751 PTOV1-AS1 RRAS MIR4749 NOSIP IRF3 PTOV1 MIR6800 MIR5088 ADM5 AKT1S1 NUP62 IL4I1 CPT1C
dgv54n68 Chr.19:49848512 - 50008788 on Build GRCh38 Loss PNKP PTOV1-AS2 MIR4751 PTOV1-AS1 MIR4749 SIGLEC11 VRK3 SIGLEC16 MIR4750 ATF5 PTOV1 TBC1D17 AKT1S1 NUP62 IL4I1

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More Information


Additional Information:

For this assay, SNP(s) [rs74546599] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

general transcription factor

Gene Ontology Categories:

Function(s)


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