Genomic Map
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Target Gene Details
Entrez Gene ID: | 3978 |
Gene Name: | DNA ligase 1 |
Gene Aliases: |
- |
Location: |
Chr.19:48115445-48170603 on Build GRCh38 |
Assay Gene Location: | Within Exon 25 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| LIG1 | NM_000234.2 | NP_000225.1 | ||
| NM_001289063.1 | NP_001275992.1 | |||
| NM_001289064.1 | NP_001275993.1 | |||
| NM_001320970.1 | NP_001307899.1 | |||
| NM_001320971.1 | NP_001307900.1 | |||
| NR_110296.1 | 24 | 3700 | ||
| NR_135497.1 | 24 | 3703 | ||
| NR_135498.1 | 22 | 3532 | ||
| NR_135499.1 | 23 | 3613 | ||
| NR_135500.1 | 24 | 3880 | ||
| NR_135501.1 | ||||
| XM_017026809.1 | XP_016882298.1 | |||
| AB208791.1 | 24 | 3423 | BAD92028.1 | |
| AK225863.1 | ||||
| AK297296.1 | ||||
| AK300370.1 | ||||
| AK300607.1 | ||||
| AK314210.1 | ||||
| BC108318.1 | AAI08319.1 | |||
| BC110622.2 | 23 | 3352 | AAI10623.1 | |
| M36067.1 | AAA59518.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv833853 | Chr.19:47982539 - 48184317 on Build GRCh38 | Loss |
 PLA2G4C-AS1
BSPH1
ELSPBP1
C19orf68
LIG1
PLA2G4C
CABP5
|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
MIR6798
FLJ26850
FLT3LG
PTOV1
CPT1C
SNAR-A3
RRAS
SNAR-A13
BCL2L12
FGF21
RCN3
SNAR-B1
TMEM143
NUCB1
SNAR-C1
BAX
CABP5
CGB7
SNAR-A12
RPL18
PRMT1
SULT2B1
CD37
SNAR-A14
SNAR-A2
MED25
LIN7B
NUCB1-AS1
MIR5088
PLA2G4C-AS1
TSKS
SNAR-A10
PTH2
RPL13A
ATF5
MIR6799
SPACA4
HSD17B14
SNAR-A7
ZNF114
SNORD32A
SNRNP70
FCGRT
VRK3
LOC105372430
SNORD35A
MIR4751
RASIP1
PLEKHA4
TULP2
SNAR-A5
SLC6A16
PRRG2
MIR6800
SNORD35B
CGB8
NTN5
SNAR-A8
PNKP
SNAR-A9
SNAR-D
ELSPBP1
HRC
SLC17A7
SPHK2
DKKL1
MIR4750
PPP1R15A
PTOV1-AS2
SNAR-C2
AKT1S1
BCAT2
SNAR-B2
LMTK3
SEC1P
MIR4324
ALDH16A1
AP2A1
LOC101928295
CCDC155
SNAR-G2
FUT2
PIH1D1
RPS11
TRPM4
DBP
GFY
CGB5
DHDH
CYTH2
TBC1D17
IRF3
KDELR1
KCNJ14
GRWD1
SNAR-A1
CCDC114
KCNA7
SNAR-C3
NUP62
SIGLEC16
C19orf73
SNAR-C5
ZNF473
SIGLEC11
NTF4
GRIN2D
LIG1
SNAR-A4
IL4I1
LOC100287477
FUZ
SNAR-G1
PLA2G4C
CGB2
SNAR-A11
MIR150
TEAD2
SCAF1
FUT1
MAMSTR
BSPH1
CGB1
SNORD34
PTOV1-AS1
EMP3
SNAR-C4
ADM5
PRR12
PPFIA3
GYS1
RUVBL2
SNAR-A6
LOC101059948
C19orf68
SNORD33
SYNGR4
FTL
LOC105447645
NOSIP
CARD8-AS1
MIR4749
CARD8
LHB
CGB3
CA11
FAM83E
IZUMO1
|
| esv34181 | Chr.19:48009377 - 48416682 on Build GRCh38 | Loss |
PLA2G4C-AS1
KDELR1
TMEM143
C19orf68
SYNGR4
PLA2G4C
CCDC114
CABP5
CARD8-AS1
CARD8
ZNF114
ELSPBP1
GRIN2D
LIG1
EMP3
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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