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See other PTBP1 CNV Assays ›
Gene Symbol
PTBP1
Assay Reference Genome
Location

Chr.19:800918 on build GRCh38
Cytoband
19p13.3
Assay ID Hs04015213_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5725

Gene Name:

 polypyrimidine tract binding protein 1

Gene Aliases:

 HNRNP-I, HNRNPI, HNRPI, PTB, PTB-1, PTB-T, PTB2, PTB3, PTB4, pPTB

Location:

 Chr.19:797392-812327 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PTBP1 NM_002819.4 NP_002810.1
NM_031990.3 NP_114367.1
NM_031991.3 NP_114368.1
XM_005259597.2 XP_005259654.1
XM_005259598.2 XP_005259655.1
AB208910.1 BAD92147.1
BC002397.2 AAH02397.1
BC004383.1 AAH04383.1
BC013694.1 AAH13694.1
BQ068293.1
BT006819.1 AAP35465.1
X60648.1 CAA43056.1
X62006.1 CAA43973.1
X65371.1 CAA46443.1
X65372.1 CAA46444.1
X66975.1 CAA47386.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3643371 Chr.19:794878 - 807625 on Build GRCh38 Loss MIR4745 PTBP1
dgv134n111 Chr.19:607984 - 967584 on Build GRCh38 Deletion HCN2 PLPPR3 ARID3A PTBP1 FGF22 FSTL3 POLRMT RNU6-9 MED16 RNF126 CFD ELANE PALM MISP MIR4745 PRTN3 R3HDM4 AZU1 KISS1R LOC101928450 PRSS57 MIR3187
nsv828353 Chr.19:775335 - 812296 on Build GRCh38 Loss MIR4745 PTBP1 LOC101928450
esv3893155 Chr.19:725939 - 804013 on Build GRCh38 Gain PALM MISP PTBP1 LOC101928450
nsv828354 Chr.19:796933 - 815173 on Build GRCh38 Gain PLPPR3 MIR4745 PTBP1 MIR3187
nsv458321 Chr.19:797079 - 850574 on Build GRCh38 Loss PLPPR3 MIR4745 PRTN3 PTBP1 AZU1 MIR3187
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion HCN2 PLPPR3 BSG THEG C2CD4C POLR2E PTBP1 SHC2 FSTL3 POLRMT ABCA7 RNU6-9 ARHGAP45 MED16 CFD ELANE RNU6-2 MIR4745 PRTN3 AZU1 TPGS1 LOC105372235 LOC101928450 MIR3187 TMEM259 GZMM ODF3L2 CDC34 ARID3A FGF22 CNN2 GRIN3B RNF126 PALM MADCAM1 WDR18 MISP R3HDM4 KISS1R PRSS57 GPX4
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss HCN2 PLPPR3 BSG C2CD4C PTBP1 SHC2 FSTL3 POLRMT RNU6-9 MED16 CFD ELANE MIR4745 PRTN3 AZU1 TPGS1 LOC105372235 LOC101928450 MIR3187 GZMM ODF3L2 CDC34 ARID3A FGF22 GRIN3B RNF126 PALM MADCAM1 WDR18 MISP R3HDM4 KISS1R PRSS57
esv3643364 Chr.19:724133 - 803706 on Build GRCh38 Gain PALM MISP PTBP1 LOC101928450

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