Hs04015505_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48036243 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	PLA2G4C CABP5 C19orf68 ELSPBP1 PLA2G4C-AS1 LIG1 BSPH1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	PTH2 PTOV1-AS2 CARD8-AS1 NUCB1 MIR150 SNAR-A2 SNAR-C5 SULT2B1 SNAR-A9 FTL SNAR-A14 GRIN2D IZUMO1 TBC1D17 LIG1 LOC101928295 LOC105447645 FLT3LG SNAR-G2 SLC17A7 SNAR-C2 DHDH ADM5 CGB8 FAM83E RCN3 CCDC155 SPHK2 TMEM143 CGB2 RPS11 SNORD33 SNAR-D IRF3 CGB7 LOC101059948 CCDC114 SLC6A16 PPP1R15A SNAR-A8 SCAF1 BCL2L12 NTF4 CYTH2 SNAR-C3 PPFIA3 CPT1C ZNF114 BAX KCNA7 SNAR-A3 SNAR-A4 PLEKHA4 TSKS PRRG2 MAMSTR ALDH16A1 SNORD35B FUZ GYS1 ZNF473 SPACA4 AP2A1 EMP3 TULP2 NUP62 SNAR-A13 CGB1 SNORD35A LIN7B TRPM4 PTOV1 FLJ26850 DBP MIR6799 SEC1P CABP5 SNAR-A6 ATF5 VRK3 MIR6800 MIR4324 PLA2G4C-AS1 SNRNP70 NOSIP CA11 SNAR-A5 CGB3 SYNGR4 MIR6798 TEAD2 SNAR-G1 CARD8 LMTK3 SNAR-A7 SIGLEC11 FUT1 MIR4749 GRWD1 GFY IL4I1 PTOV1-AS1 HRC FGF21 SNAR-C4 ELSPBP1 LOC105372430 FCGRT SNORD32A NUCB1-AS1 CD37 C19orf73 SNAR-A10 MIR5088 SNAR-B1 SNAR-C1 LHB HSD17B14 NTN5 MED25 CGB5 RPL13A SNAR-A12 SNORD34 PIH1D1 FUT2 RPL18 DKKL1 RUVBL2 PRMT1 RASIP1 LOC100287477 PRR12 SIGLEC16 KCNJ14 AKT1S1 SNAR-B2 MIR4750 BSPH1 SNAR-A1 PLA2G4C BCAT2 PNKP C19orf68 SNAR-A11 RRAS MIR4751 KDELR1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CABP5 CARD8-AS1 CCDC114 EMP3 ELSPBP1 PLA2G4C-AS1 PLA2G4C TMEM143 ZNF114 SYNGR4 C19orf68 GRIN2D CARD8 LIG1 KDELR1
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C CABP5 ELSPBP1 PLA2G4C-AS1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C CABP5 ELSPBP1 PLA2G4C-AS1
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	SULT2A1 CABP5 SNAR-C2 SNAR-C4 ELSPBP1 SNAR-A13 SNAR-A2 BSPH1 SNAR-A1 SNAR-C3 SNAR-C5 SNAR-A12 SNAR-A3 SNAR-C1 TPRX1 LINC01595 CRX
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C CABP5 ELSPBP1 PLA2G4C-AS1
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SULT2A1 CABP5 SNAR-C2 SNAR-C4 ELSPBP1 PLA2G4C-AS1 SNAR-A13 SNAR-A2 BSPH1 SNAR-A1 SNAR-C3 SNAR-C5 PLA2G4C SNAR-A12 SNAR-A3 SNAR-C1 TPRX1 LINC01595 CRX

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding