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See other SCAF1 CNV Assays ›
Gene Symbol
SCAF1
Assay Reference Genome
Location

Chr.19:49644528 on build GRCh38
Cytoband
19q13.33
Assay ID Hs04020004_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 58506

Gene Name:

 SR-related CTD associated factor 1

Gene Aliases:

 SRA1

Location:

 Chr.19:49640483-49658649 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SCAF1 NM_021228.2 NP_067051.2
XM_005259122.4 XP_005259179.1
XM_011527194.2 XP_011525496.1
AK024444.1
BC011662.2 AAH11662.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss NOSIP PRR12 PRMT1 PRRG2 IRF3 RRAS BCL2L12 CPT1C SCAF1 ADM5 MIR5088
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss NOSIP PRR12 PRMT1 PRRG2 IRF3 RRAS BCL2L12 CPT1C SCAF1 ADM5 MIR5088
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss BSPH1 MIR4750 LOC101059948 LMTK3 MIR4324 GRIN2D SPHK2 SNAR-C1 CD37 FGF21 DBP CCDC155 MIR150 SNAR-A4 SPACA4 MIR4749 SNAR-A2 TULP2 BAX SNAR-A8 SNORD35A CGB7 DKKL1 IRF3 MIR6800 SULT2B1 IL4I1 PIH1D1 NOSIP AKT1S1 SNAR-A10 SNAR-B1 KDELR1 LIN7B CGB5 CGB2 NTF4 SCAF1 SNAR-A3 TEAD2 SNAR-A6 VRK3 HSD17B14 RASIP1 SNAR-A13 PNKP BCL2L12 SNAR-A7 AP2A1 FTL SYNGR4 SNAR-C5 FUT2 SNAR-C2 SNAR-A1 SNAR-C4 SNAR-C3 RUVBL2 PPP1R15A SNAR-G2 PRMT1 SLC17A7 MIR6798 ZNF114 NTN5 NUCB1 FUZ KCNJ14 CGB8 LIG1 MED25 SEC1P SNAR-B2 KCNA7 TRPM4 CGB3 PLA2G4C ZNF473 HRC DHDH SNAR-A5 BCAT2 PTH2 CARD8 CGB1 CYTH2 CABP5 MIR5088 MIR6799 C19orf68 NUP62 SNAR-A11 FCGRT EMP3 PLEKHA4 SNAR-G1 FUT1 PRRG2 SNAR-A14 ALDH16A1 SNORD35B LOC100287477 SNORD33 SNORD32A FAM83E TBC1D17 RRAS LOC101928295 FLT3LG MIR4751 RCN3 PLA2G4C-AS1 CARD8-AS1 RPL13A PTOV1 SLC6A16 SIGLEC11 LOC105372430 ELSPBP1 GYS1 FLJ26850 ADM5 PTOV1-AS1 ATF5 GFY PRR12 NUCB1-AS1 MAMSTR CPT1C PPFIA3 RPL18 SNAR-D SNORD34 SNAR-A12 C19orf73 RPS11 SIGLEC16 LOC105447645 TSKS SNRNP70 PTOV1-AS2 CA11 CCDC114 IZUMO1 SNAR-A9 LHB TMEM143 GRWD1
nsv470150 Chr.19:49618821 - 49856789 on Build GRCh38 Gain PTOV1 PRMT1 IRF3 BCL2L12 MIR6800 FUZ AP2A1 ADM5 PTOV1-AS1 MIR5088 MIR6799 MED25 PRR12 RRAS TSKS PTOV1-AS2 CPT1C MIR4749 SCAF1
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain NOSIP PRR12 PRMT1 PRRG2 IRF3 RRAS BCL2L12 CPT1C SCAF1 ADM5 MIR5088
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MIR4750 PTOV1 PNKP BCL2L12 AP2A1 ADM5 PTOV1-AS1 MIR5088 MIR6799 ATF5 PRR12 NUP62 CPT1C MIR4749 PRMT1 PRRG2 IRF3 MIR6800 FUZ IL4I1 TBC1D17 MED25 NOSIP RRAS TSKS AKT1S1 MIR4751 PTOV1-AS2 SCAF1
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion RPL13A BCL2L12 AP2A1 ADM5 PTOV1-AS1 MIR5088 MIR150 MIR6799 PRR12 FCGRT CPT1C SNORD35A SNORD34 PRMT1 PRRG2 IRF3 RPS11 MIR6800 FUZ SNORD35B SNORD33 SNORD32A MED25 NOSIP RRAS TSKS RCN3 SCAF1
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss NOSIP PRR12 PRMT1 PRRG2 IRF3 RRAS BCL2L12 SCAF1

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