Hs04020632_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48045222 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	XM_017026992.1			XP_016882481.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	LIG1 C19orf68 PLA2G4C-AS1 ELSPBP1 CABP5 PLA2G4C BSPH1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	FGF21 IRF3 SIGLEC11 CD37 PPP1R15A SNAR-A3 PPFIA3 SNAR-C3 ALDH16A1 SCAF1 MED25 PRR12 SNORD32A SNAR-A11 NUP62 PIH1D1 TMEM143 LIN7B MIR5088 GRWD1 GRIN2D SPHK2 FUT2 EMP3 CYTH2 AKT1S1 ZNF114 BAX PTOV1 SNAR-B1 NUCB1 PTOV1-AS1 IL4I1 RPS11 MAMSTR PRMT1 MIR6800 SNAR-B2 SEC1P FLJ26850 BCAT2 PNKP CGB8 BSPH1 VRK3 GFY NUCB1-AS1 CGB5 SIGLEC16 AP2A1 IZUMO1 RPL13A MIR4324 KDELR1 LOC105372430 ATF5 LIG1 SNORD35B ADM5 TEAD2 SNORD35A SNAR-A14 FAM83E SLC6A16 SNAR-A9 NTF4 TBC1D17 SNAR-A2 SNAR-A8 C19orf73 DKKL1 DBP FLT3LG C19orf68 PTH2 SNAR-C1 HRC MIR6798 SULT2B1 SNRNP70 NTN5 SNAR-A5 SNAR-C5 MIR6799 SYNGR4 CCDC155 CGB7 SNAR-A1 KCNA7 FCGRT TULP2 SLC17A7 MIR4750 FTL TSKS PLA2G4C MIR150 FUT1 DHDH RASIP1 SNAR-D CA11 RPL18 FUZ CPT1C SNAR-A12 SNAR-G2 PRRG2 ELSPBP1 BCL2L12 LOC101928295 CGB1 CARD8-AS1 MIR4751 KCNJ14 GYS1 CGB2 MIR4749 LOC105447645 SNAR-A10 SNAR-A4 LMTK3 PLA2G4C-AS1 ZNF473 NOSIP SNORD33 CABP5 CARD8 CGB3 SNAR-A7 LOC101059948 LOC100287477 PLEKHA4 CCDC114 SNAR-C2 PTOV1-AS2 TRPM4 SPACA4 HSD17B14 SNAR-G1 SNAR-A13 SNAR-C4 RRAS SNAR-A6 RCN3 LHB RUVBL2 SNORD34
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	PLA2G4C-AS1 CABP5 KDELR1 CARD8 TMEM143 GRIN2D LIG1 C19orf68 CCDC114 ELSPBP1 EMP3 ZNF114 CARD8-AS1 PLA2G4C SYNGR4
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 CABP5 PLA2G4C
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 CABP5 PLA2G4C
nsv1062163	Chr.19:48040339 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 CABP5 PLA2G4C
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C-AS1 ELSPBP1 CABP5 PLA2G4C
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	PLA2G4C-AS1 SNAR-A1 TPRX1 SNAR-A2 CABP5 LINC01595 SNAR-A12 CRX SNAR-C2 SNAR-A3 SNAR-A13 SNAR-C4 SNAR-C3 SULT2A1 SNAR-C1 ELSPBP1 SNAR-C5 PLA2G4C BSPH1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding