Hs04021928_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48029519 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4	6	1692	NP_062829.1
	XM_017026992.1	8	1893	XP_016882481.1
	BU734136.1	1	154

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	CABP5 LIG1 PLA2G4C-AS1 ELSPBP1 C19orf68 PLA2G4C BSPH1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	MIR4749 SNRNP70 LMTK3 MAMSTR ZNF473 SEC1P AP2A1 NUP62 CCDC155 FUT2 ZNF114 DHDH NOSIP KDELR1 SNAR-A13 PPFIA3 GYS1 BCL2L12 CABP5 GFY SCAF1 HSD17B14 SNORD35B PPP1R15A SNORD34 FGF21 SNAR-C3 IZUMO1 KCNA7 CARD8 SNAR-C5 SNAR-C2 PTOV1-AS2 VRK3 FTL MIR150 ELSPBP1 EMP3 SNAR-A8 LIN7B TULP2 SNAR-A7 SNAR-C1 SNAR-A12 PNKP RPL13A SULT2B1 SNAR-A6 CA11 SNAR-A10 RUVBL2 SLC17A7 BCAT2 LOC101928295 AKT1S1 FAM83E SPACA4 NTF4 MED25 SNORD32A SNAR-A14 PTH2 CCDC114 PLA2G4C-AS1 FUT1 DKKL1 PLEKHA4 IRF3 PTOV1-AS1 LIG1 SNAR-A2 RPL18 ATF5 SNAR-B2 PLA2G4C GRIN2D SNAR-A3 KCNJ14 SYNGR4 DBP SPHK2 SNAR-A1 IL4I1 RRAS MIR6798 LOC100287477 CGB2 MIR6800 CGB5 CGB1 SNAR-A5 BSPH1 SNAR-A9 C19orf68 PTOV1 C19orf73 PRMT1 SNAR-A11 CGB7 SNAR-C4 ALDH16A1 SNAR-B1 LHB MIR4751 SNAR-G2 PRR12 SNORD35A NTN5 MIR6799 SNAR-G1 BAX PIH1D1 NUCB1 GRWD1 SNAR-D CARD8-AS1 SLC6A16 LOC101059948 LOC105447645 MIR4750 CYTH2 SIGLEC16 RPS11 FLJ26850 TMEM143 TSKS TEAD2 ADM5 TBC1D17 MIR4324 HRC MIR5088 LOC105372430 PRRG2 FLT3LG CPT1C SNORD33 CD37 FUZ SNAR-A4 TRPM4 RASIP1 CGB8 SIGLEC11 FCGRT CGB3 NUCB1-AS1 RCN3
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	CABP5 PLA2G4C-AS1 ELSPBP1 PLA2G4C
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CABP5 CCDC114 SYNGR4 PLA2G4C-AS1 ELSPBP1 EMP3 C19orf68 ZNF114 CARD8 LIG1 CARD8-AS1 TMEM143 KDELR1 PLA2G4C GRIN2D
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	CABP5 PLA2G4C-AS1 ELSPBP1 PLA2G4C
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	CABP5 TPRX1 ELSPBP1 CRX LINC01595 SNAR-C1 SNAR-A12 SNAR-C3 SNAR-A1 SNAR-C5 SNAR-C4 SULT2A1 SNAR-C2 SNAR-A2 SNAR-A13 SNAR-A3 BSPH1
nsv579900	Chr.19:48019612 - 48033524 on Build GRCh38	Loss	CABP5 ELSPBP1
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	CABP5 PLA2G4C-AS1 ELSPBP1 PLA2G4C
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	CABP5 TPRX1 PLA2G4C-AS1 ELSPBP1 CRX LINC01595 SNAR-C1 SNAR-A12 SNAR-C3 SNAR-A1 SNAR-C5 SNAR-C4 SULT2A1 SNAR-C2 SNAR-A2 SNAR-A13 PLA2G4C SNAR-A3 BSPH1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding