Hs04021928_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48029519 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4	6	1692	NP_062829.1
	XM_017026992.1	8	1893	XP_016882481.1
	BU734136.1	1	154

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	PLA2G4C-AS1 LIG1 CABP5 PLA2G4C ELSPBP1 C19orf68 BSPH1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	CARD8 MIR5088 ADM5 DBP FGF21 CGB5 LIN7B CPT1C FUT1 SNAR-A8 NTF4 LOC101928295 SNAR-A3 PRMT1 CCDC114 BCL2L12 SNAR-A13 FTL KDELR1 SNAR-A9 NUP62 SNAR-A12 FLT3LG AP2A1 LIG1 RCN3 SNORD35B CABP5 SNAR-B1 TULP2 PPFIA3 CCDC155 PPP1R15A RPL13A SLC6A16 AKT1S1 GRIN2D MIR4324 VRK3 RASIP1 IRF3 SYNGR4 BCAT2 SNAR-A11 MIR150 CGB7 SNAR-C3 CD37 NTN5 BAX MIR6799 CYTH2 C19orf73 SNAR-A2 LOC105372430 SIGLEC16 MIR4750 SNORD35A LHB ZNF114 MIR6798 PRRG2 SNAR-C2 SNAR-A5 CGB1 PLA2G4C TSKS DHDH BSPH1 LOC105447645 PLA2G4C-AS1 EMP3 CA11 FLJ26850 ALDH16A1 HSD17B14 TEAD2 GFY SNORD32A SNAR-A1 SNAR-A10 FUZ SCAF1 SNAR-A4 NUCB1 C19orf68 LOC100287477 SLC17A7 PRR12 RUVBL2 CGB2 SNAR-G2 PLEKHA4 SNAR-D RRAS PTOV1-AS1 SNAR-A7 SNORD33 GYS1 IL4I1 PTOV1 SNAR-C1 PTOV1-AS2 SNORD34 CGB3 IZUMO1 SPHK2 SNAR-A6 TMEM143 KCNJ14 GRWD1 ZNF473 SIGLEC11 CGB8 SNAR-A14 FCGRT HRC NOSIP SEC1P RPS11 SNRNP70 ATF5 PNKP FUT2 SNAR-B2 NUCB1-AS1 MIR4749 MAMSTR SNAR-C4 SNAR-C5 CARD8-AS1 SPACA4 MED25 SULT2B1 TRPM4 PTH2 ELSPBP1 PIH1D1 FAM83E TBC1D17 SNAR-G1 LMTK3 KCNA7 RPL18 DKKL1 LOC101059948 MIR6800 MIR4751
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CARD8-AS1 LIG1 CARD8 CABP5 PLA2G4C ELSPBP1 C19orf68 TMEM143 PLA2G4C-AS1 GRIN2D CCDC114 EMP3 ZNF114 SYNGR4 KDELR1
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C-AS1 CABP5 PLA2G4C ELSPBP1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 CABP5 PLA2G4C ELSPBP1
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	SNAR-C5 SNAR-C3 LINC01595 SNAR-A1 SNAR-C2 SNAR-C1 CABP5 SULT2A1 TPRX1 ELSPBP1 SNAR-A2 BSPH1 SNAR-A3 CRX SNAR-C4 SNAR-A13 SNAR-A12
nsv579900	Chr.19:48019612 - 48033524 on Build GRCh38	Loss	CABP5 ELSPBP1
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C-AS1 CABP5 PLA2G4C ELSPBP1
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-C5 SNAR-C3 LINC01595 SNAR-A1 SNAR-C2 SNAR-C1 CABP5 SULT2A1 TPRX1 PLA2G4C ELSPBP1 SNAR-A2 BSPH1 PLA2G4C-AS1 SNAR-A3 CRX SNAR-C4 SNAR-A13 SNAR-A12

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding