Hs04022129_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48042415 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AA318398.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	C19orf68 PLA2G4C CABP5 PLA2G4C-AS1 ELSPBP1 LIG1 BSPH1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	DBP PIH1D1 SNORD34 LIN7B ADM5 FLJ26850 GYS1 BAX SCAF1 SNAR-C1 SNAR-G1 PPP1R15A MAMSTR IRF3 HSD17B14 SNAR-A7 KDELR1 PTOV1-AS2 SIGLEC11 ATF5 PTH2 ELSPBP1 RPL13A C19orf68 C19orf73 SNAR-A8 SNAR-A4 LOC100287477 SNAR-A13 TEAD2 SYNGR4 SNAR-A9 PTOV1 MIR4750 MIR6799 SNAR-A1 PLA2G4C SNAR-A2 RPS11 SEC1P CGB1 SNAR-A5 CPT1C MIR4324 CCDC155 SNAR-B2 RRAS CGB3 AKT1S1 GRWD1 FAM83E SNORD35B SPHK2 RUVBL2 GFY FGF21 MIR150 LOC101059948 PPFIA3 SNAR-A6 SNAR-C4 KCNA7 TBC1D17 SNAR-A10 IL4I1 HRC PRR12 MIR6798 CYTH2 SNORD32A LMTK3 SNAR-D LHB ALDH16A1 SPACA4 CARD8-AS1 CA11 FUT1 FCGRT SNRNP70 CGB7 SNAR-C5 SNAR-A11 SLC17A7 PTOV1-AS1 SIGLEC16 CGB2 FUZ NUCB1-AS1 TMEM143 SLC6A16 NUCB1 BCL2L12 SNAR-A14 SNAR-A3 FTL ZNF473 NOSIP PLEKHA4 SNAR-C2 FUT2 MIR4751 IZUMO1 MIR4749 PLA2G4C-AS1 RCN3 FLT3LG SNAR-B1 NTN5 GRIN2D LIG1 DKKL1 EMP3 CGB8 PNKP NTF4 ZNF114 PRRG2 AP2A1 SNAR-G2 CARD8 MIR5088 LOC101928295 LOC105447645 BCAT2 SNORD33 TSKS SNAR-A12 CCDC114 CGB5 BSPH1 SNORD35A TULP2 LOC105372430 SULT2B1 MED25 MIR6800 VRK3 CD37 KCNJ14 PRMT1 TRPM4 SNAR-C3 NUP62 DHDH RPL18 CABP5 RASIP1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	C19orf68 TMEM143 GRIN2D SYNGR4 LIG1 CCDC114 CARD8-AS1 EMP3 PLA2G4C CABP5 KDELR1 PLA2G4C-AS1 ZNF114 CARD8 ELSPBP1
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C CABP5 PLA2G4C-AS1 ELSPBP1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C CABP5 PLA2G4C-AS1 ELSPBP1
nsv1062163	Chr.19:48040339 - 48075632 on Build GRCh38	Gain	PLA2G4C CABP5 PLA2G4C-AS1
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C CABP5 PLA2G4C-AS1 ELSPBP1
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	CRX LINC01595 SNAR-A13 TPRX1 SNAR-A12 SNAR-C1 SULT2A1 BSPH1 SNAR-C3 SNAR-A3 SNAR-A1 PLA2G4C SNAR-A2 CABP5 SNAR-C2 PLA2G4C-AS1 SNAR-C4 SNAR-C5 ELSPBP1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding