Hs04022129_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48042415 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AA318398.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	ELSPBP1 LIG1 PLA2G4C-AS1 BSPH1 C19orf68 CABP5 PLA2G4C
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SIGLEC11 LIN7B MIR4750 SNAR-C2 SNAR-A1 MIR150 CARD8-AS1 KCNJ14 IL4I1 FUT1 MIR4749 PRR12 RPS11 SCAF1 TEAD2 SNORD34 VRK3 PPP1R15A FUZ SNAR-A12 SNAR-A9 ADM5 SLC17A7 PRMT1 GRWD1 BCL2L12 PLA2G4C CA11 BAX FUT2 CYTH2 MIR5088 NOSIP MIR4324 BCAT2 MIR6799 SNAR-C1 SNAR-A10 LOC105372430 SNAR-B2 SNAR-A8 SNRNP70 CGB5 ELSPBP1 CCDC155 ZNF473 RPL13A DKKL1 PTH2 TRPM4 CGB3 KCNA7 CD37 PTOV1-AS1 TMEM143 SNAR-G2 LOC105447645 IRF3 CABP5 FCGRT TSKS IZUMO1 LHB SNAR-B1 EMP3 SPACA4 SPHK2 C19orf68 PTOV1-AS2 LOC101059948 PIH1D1 RCN3 RASIP1 SNAR-G1 DHDH SNORD35A DBP CGB7 MED25 SNAR-A7 CARD8 CGB8 MIR4751 SEC1P LOC100287477 CGB1 SNAR-A5 PNKP RUVBL2 SNAR-A2 GYS1 NUP62 PLEKHA4 PTOV1 AP2A1 SNAR-A13 FGF21 ALDH16A1 SNAR-C5 SNAR-A11 NUCB1-AS1 SNAR-C4 MIR6800 SIGLEC16 CPT1C CCDC114 CGB2 SULT2B1 SNAR-A14 LIG1 SNORD33 TBC1D17 TULP2 GFY ATF5 NTF4 HSD17B14 SLC6A16 FTL SNAR-D HRC SNAR-C3 RPL18 KDELR1 NTN5 FLJ26850 MAMSTR NUCB1 BSPH1 PRRG2 C19orf73 FLT3LG SNAR-A4 SNORD35B ZNF114 PLA2G4C-AS1 SYNGR4 SNAR-A6 LOC101928295 SNAR-A3 FAM83E RRAS PPFIA3 LMTK3 GRIN2D AKT1S1 MIR6798 SNORD32A
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	ELSPBP1 PLA2G4C-AS1 CABP5 PLA2G4C
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	EMP3 ZNF114 ELSPBP1 PLA2G4C-AS1 SYNGR4 C19orf68 CARD8-AS1 PLA2G4C KDELR1 CCDC114 TMEM143 LIG1 CARD8 GRIN2D CABP5
nsv1062163	Chr.19:48040339 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 CABP5 PLA2G4C
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	ELSPBP1 PLA2G4C-AS1 CABP5 PLA2G4C
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	ELSPBP1 PLA2G4C-AS1 CABP5 PLA2G4C
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-A12 ELSPBP1 PLA2G4C-AS1 SNAR-C2 SNAR-A1 LINC01595 SNAR-C5 SNAR-C4 SNAR-A2 SNAR-C3 PLA2G4C SNAR-A3 SULT2A1 CRX BSPH1 TPRX1 CABP5 SNAR-C1 SNAR-A13

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding