Hs04023116_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48044744 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	XM_017026992.1			XP_016882481.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	CABP5 ELSPBP1 PLA2G4C-AS1 LIG1 C19orf68 BSPH1 PLA2G4C
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	MIR4324 SNAR-C1 SNAR-A1 CCDC114 KCNJ14 TEAD2 SNAR-C4 GFY LHB FAM83E NUCB1 RPS11 LIG1 FLT3LG HRC RUVBL2 MIR6800 SPACA4 SNRNP70 CYTH2 DKKL1 DHDH IL4I1 RASIP1 LOC105447645 SLC17A7 EMP3 SNAR-A12 PLA2G4C-AS1 CGB3 KCNA7 C19orf68 CA11 CPT1C PLA2G4C TRPM4 SCAF1 PRR12 MIR5088 NOSIP CGB8 SNAR-B1 BSPH1 PPP1R15A PIH1D1 IZUMO1 MIR6799 SIGLEC16 SNAR-D SNAR-A13 ZNF473 FGF21 RPL18 SNAR-C5 NTF4 SPHK2 NTN5 SNAR-A5 TULP2 C19orf73 FLJ26850 SIGLEC11 MIR6798 NUP62 SNAR-G2 LOC101059948 AP2A1 FCGRT NUCB1-AS1 GRIN2D PTOV1-AS1 PRMT1 PPFIA3 PRRG2 LOC105372430 BAX MIR4749 PTOV1 SYNGR4 LIN7B CGB1 KDELR1 MAMSTR AKT1S1 SNAR-C3 PNKP RPL13A GRWD1 BCL2L12 PTOV1-AS2 MED25 DBP ELSPBP1 SNAR-A8 MIR4751 IRF3 SNAR-A11 ATF5 SNAR-A9 CGB5 LOC100287477 SNAR-A6 SEC1P VRK3 CABP5 SNORD34 SNORD33 SULT2B1 TMEM143 LMTK3 SNORD35A CARD8 PTH2 CGB7 FUZ TSKS SNAR-A7 GYS1 SNAR-B2 LOC101928295 MIR4750 TBC1D17 PLEKHA4 CGB2 CD37 SNAR-A10 ZNF114 SNAR-A3 CCDC155 FUT1 SNAR-C2 SNAR-G1 SLC6A16 BCAT2 SNAR-A4 FUT2 MIR150 SNAR-A14 SNORD32A CARD8-AS1 RRAS HSD17B14 ADM5 RCN3 FTL SNAR-A2 SNORD35B ALDH16A1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CARD8 SYNGR4 KDELR1 CCDC114 GRIN2D CABP5 CARD8-AS1 ELSPBP1 EMP3 TMEM143 PLA2G4C-AS1 LIG1 C19orf68 ZNF114 PLA2G4C
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	CABP5 ELSPBP1 PLA2G4C-AS1 PLA2G4C
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	CABP5 ELSPBP1 PLA2G4C-AS1 PLA2G4C
nsv1062163	Chr.19:48040339 - 48075632 on Build GRCh38	Gain	CABP5 PLA2G4C-AS1 PLA2G4C
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	CABP5 ELSPBP1 PLA2G4C-AS1 PLA2G4C
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-A3 SNAR-C1 SNAR-C2 SNAR-A1 SNAR-C3 BSPH1 CRX SNAR-C4 CABP5 LINC01595 ELSPBP1 SNAR-A12 PLA2G4C-AS1 SNAR-A13 TPRX1 SULT2A1 SNAR-A2 SNAR-C5 PLA2G4C

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding