Hs04023827_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48043609 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AA318398.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	PLA2G4C-AS1 ELSPBP1 C19orf68 CABP5 LIG1 PLA2G4C BSPH1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SNAR-C1 PTH2 MIR4749 DHDH CGB8 KCNJ14 SNORD35B GRIN2D SNAR-A11 SNAR-A14 BCL2L12 PTOV1-AS2 SNAR-C4 PPFIA3 PIH1D1 SNORD32A SNAR-A4 IZUMO1 ZNF114 SNAR-A9 ALDH16A1 SNAR-A10 LOC100287477 HRC DKKL1 MIR6799 SNORD33 FCGRT PLA2G4C-AS1 SNAR-A6 RRAS ATF5 RCN3 SNAR-G2 ZNF473 RASIP1 MIR4324 CARD8 RUVBL2 GFY SNAR-A7 GRWD1 IL4I1 SNAR-C3 CYTH2 SEC1P C19orf68 C19orf73 SNAR-D CPT1C SNAR-B1 SNAR-A13 TMEM143 BSPH1 PLEKHA4 RPL18 NUCB1-AS1 TEAD2 RPL13A CGB1 ADM5 SULT2B1 LOC105447645 TULP2 BCAT2 DBP SPACA4 PTOV1-AS1 SYNGR4 CA11 PNKP LOC105372430 TRPM4 LOC101928295 MIR4751 SIGLEC16 PRMT1 PTOV1 FLJ26850 FUT1 MED25 CD37 SNAR-A3 SNRNP70 FTL CGB3 KDELR1 MAMSTR SNAR-C2 LIG1 PPP1R15A PRR12 CGB2 SNAR-B2 RPS11 SNORD34 KCNA7 LMTK3 SNAR-A1 SLC17A7 CGB7 NTN5 BAX SNAR-A5 MIR4750 CCDC114 FUZ CGB5 IRF3 ELSPBP1 NUP62 SCAF1 FLT3LG TBC1D17 FGF21 FAM83E MIR5088 FUT2 SNAR-A8 HSD17B14 SNORD35A EMP3 NTF4 SNAR-G1 SNAR-C5 LIN7B PLA2G4C AKT1S1 SNAR-A2 MIR6798 LOC101059948 GYS1 TSKS SIGLEC11 CABP5 MIR150 CARD8-AS1 SLC6A16 VRK3 LHB NUCB1 NOSIP CCDC155 AP2A1 PRRG2 SPHK2 SNAR-A12 MIR6800
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CCDC114 ZNF114 CARD8 SYNGR4 ELSPBP1 GRIN2D KDELR1 CABP5 LIG1 CARD8-AS1 PLA2G4C-AS1 EMP3 C19orf68 PLA2G4C TMEM143
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 CABP5 PLA2G4C
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 CABP5 PLA2G4C
nsv1062163	Chr.19:48040339 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 CABP5 PLA2G4C
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C-AS1 ELSPBP1 CABP5 PLA2G4C
esv2619667	Chr.19:48043334 - 48044098 on Build GRCh38	Insertion	CABP5
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-C1 SNAR-A3 SNAR-A2 ELSPBP1 SNAR-C2 CABP5 SNAR-C3 SNAR-C4 PLA2G4C-AS1 SNAR-A1 CRX LINC01595 TPRX1 SNAR-A12 SULT2A1 SNAR-C5 SNAR-A13 PLA2G4C BSPH1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding