Hs04030091_cn

• Gene Symbol: SLC1A5
• Assay Reference Genome Location: Chr.19:46771009 on build GRCh38
• Cytoband: 19q13.32

Target Gene Details

• Entrez Gene ID: 6510
• Gene Name: solute carrier family 1 member 5
• Gene Aliases: AAAT, ASCT2, ATBO, M7V1, M7VS1, R16, RDRC
• Location: Chr.19:46759685-46788622 on Build GRCh38
• Assay Gene Location: Within Intron 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC1A5	XM_005259167.4			XP_005259224.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3644536	Chr.19:46768258 - 46772221 on Build GRCh38	Loss	SLC1A5
nsv833850	Chr.19:46703285 - 46867053 on Build GRCh38	Loss	MIR320E STRN4 LOC107987269 PRKD2 ARHGAP35 FKRP AP2S1 SLC1A5 SNAR-E
dgv3608n100	Chr.19:46757741 - 46865807 on Build GRCh38	Gain	ARHGAP35 FKRP AP2S1 SLC1A5 SNAR-E

More Information

Additional Information:

For this assay, SNP(s) [rs72477169] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

primary active transporter

Gene Ontology Categories:

Process(es)

amino acid transmembrane transport
amino acid transport
glutamine transport
neutral amino acid transport
viral entry into host cell

Function(s)

virus receptor activity
receptor activity
protein binding
amino acid transmembrane transporter activity
neutral amino acid transmembrane transporter activity
L-glutamine transmembrane transporter activity
symporter activity