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See other KLF16 CNV Assays ›
Gene Symbol
KLF16
Assay Reference Genome
Location

Chr.19:1857868 on build GRCh38
Cytoband
19p13.3
Assay ID Hs04030541_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 83855

Gene Name:

 Kruppel like factor 16

Gene Aliases:

 BTEB4, DRRF, NSLP2

Location:

 Chr.19:1852399-1863565 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KLF16 NM_031918.3 NP_114124.1
AF327440.1 AAK15698.1
CV809534.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3893156 Chr.19:1766738 - 2115791 on Build GRCh38 Loss CSNK1G2 KLF16 CSNK1G2-AS1 MKNK2 LOC100288123 ATP8B3 MOB3A IZUMO4 SCAMP4 MIR1909 ADAT3 ABHD17A REXO1 ONECUT3 AP3D1 BTBD2
esv2669985 Chr.19:1852046 - 1864993 on Build GRCh38 Deletion KLF16
esv32942 Chr.19:1320268 - 1999205 on Build GRCh38 Gain+Loss NDUFS7 CSNK1G2 C19orf25 KLF16 CSNK1G2-AS1 LOC100288123 ATP8B3 APC2 MEX3D REEP6 DAZAP1 ONECUT3 ADAMTSL5 UQCR11 TCF3 PLK5 PCSK4 SCAMP4 MIR1909 ADAT3 MBD3 ABHD17A REXO1 GAMT BTBD2 MUM1 RPS15
nsv470107 Chr.19:1782799 - 2100347 on Build GRCh38 Loss CSNK1G2 KLF16 CSNK1G2-AS1 MKNK2 LOC100288123 ATP8B3 MOB3A IZUMO4 SCAMP4 MIR1909 ADAT3 ABHD17A REXO1 BTBD2
nsv1160560 Chr.19:1791100 - 1916393 on Build GRCh38 Deletion ABHD17A REXO1 KLF16 LOC100288123 ATP8B3 SCAMP4 MIR1909 ADAT3
nsv578338 Chr.19:1847699 - 1869095 on Build GRCh38 Loss REXO1 KLF16
nsv578337 Chr.19:1808864 - 1904613 on Build GRCh38 Gain ABHD17A REXO1 KLF16 LOC100288123 ATP8B3 MIR1909
nsv953942 Chr.19:1371602 - 2057401 on Build GRCh38 Deletion NDUFS7 CSNK1G2 C19orf25 KLF16 CSNK1G2-AS1 LOC100288123 ATP8B3 APC2 MEX3D REEP6 DAZAP1 ONECUT3 ADAMTSL5 UQCR11 TCF3 PLK5 PCSK4 MKNK2 SCAMP4 MIR1909 ADAT3 MBD3 ABHD17A REXO1 GAMT BTBD2 MUM1 RPS15
esv2660894 Chr.19:1854446 - 1872693 on Build GRCh38 Deletion KLF16

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More Information


Additional Information:

For this assay, SNP(s) [rs117822420] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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