Hs04033326_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48032016 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1
	BQ185108.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	PLA2G4C-AS1 C19orf68 BSPH1 ELSPBP1 PLA2G4C LIG1 CABP5
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SNAR-A4 C19orf68 MIR150 SNAR-A8 GYS1 MIR4750 LOC100287477 SNORD33 MIR4751 CGB7 DBP CCDC155 BAX CGB2 HRC MIR5088 CA11 LMTK3 ATF5 SNAR-C5 PRR12 KDELR1 NUCB1-AS1 SLC17A7 ALDH16A1 SYNGR4 RRAS TEAD2 AKT1S1 NOSIP SIGLEC16 PLEKHA4 GRWD1 PLA2G4C SLC6A16 CD37 BSPH1 SNAR-G2 ELSPBP1 RUVBL2 SNAR-A2 FLJ26850 SNAR-B1 FUT1 SNAR-A14 FAM83E LOC105447645 FUZ SNAR-C4 ZNF114 PRRG2 MIR6799 NUCB1 SNAR-A11 CPT1C RPL13A SNAR-G1 RCN3 PPP1R15A PTOV1 RASIP1 MIR6798 LHB BCAT2 PIH1D1 CGB3 CARD8 MED25 NUP62 SNORD32A ZNF473 SNAR-C3 LOC101928295 PNKP CGB5 SNAR-A1 NTN5 SPHK2 C19orf73 LOC105372430 PRMT1 MIR4324 IZUMO1 GRIN2D MIR6800 SNAR-A9 SULT2B1 CARD8-AS1 PTOV1-AS2 SNAR-A5 DKKL1 TULP2 SNAR-A3 PTH2 FUT2 SNORD34 SNAR-D SEC1P IRF3 PLA2G4C-AS1 PPFIA3 TRPM4 EMP3 SNAR-A6 PTOV1-AS1 TMEM143 SNRNP70 CCDC114 TBC1D17 MIR4749 CABP5 FLT3LG SNAR-B2 SIGLEC11 RPS11 FTL VRK3 LIG1 KCNA7 FCGRT SPACA4 SCAF1 CYTH2 ADM5 GFY SNAR-A7 FGF21 CGB1 TSKS NTF4 SNAR-A10 KCNJ14 SNAR-A13 DHDH RPL18 SNAR-C1 SNAR-A12 SNORD35A CGB8 MAMSTR BCL2L12 LOC101059948 SNORD35B IL4I1 AP2A1 LIN7B SNAR-C2 HSD17B14
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 PLA2G4C CABP5
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	PLA2G4C-AS1 C19orf68 KDELR1 EMP3 ELSPBP1 LIG1 SYNGR4 TMEM143 CCDC114 GRIN2D CARD8-AS1 PLA2G4C CABP5 ZNF114 CARD8
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 PLA2G4C CABP5
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	SNAR-A13 SNAR-C3 CRX SNAR-C1 BSPH1 SNAR-A12 SNAR-A1 ELSPBP1 LINC01595 SNAR-A2 SNAR-A3 TPRX1 SNAR-C4 CABP5 SNAR-C2 SULT2A1 SNAR-C5
nsv579900	Chr.19:48019612 - 48033524 on Build GRCh38	Loss	ELSPBP1 CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C-AS1 ELSPBP1 PLA2G4C CABP5
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	PLA2G4C-AS1 SNAR-A13 SNAR-C3 CRX SNAR-C1 BSPH1 SNAR-A12 SNAR-A1 ELSPBP1 LINC01595 SNAR-A2 SNAR-A3 TPRX1 PLA2G4C SNAR-C4 CABP5 SNAR-C2 SULT2A1 SNAR-C5

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding