Hs04033326_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48032016 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1
	BQ185108.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	PLA2G4C PLA2G4C-AS1 CABP5 BSPH1 LIG1 ELSPBP1 C19orf68
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	RPL13A TMEM143 SNAR-C1 CD37 SNAR-A11 SNAR-B1 IL4I1 LIG1 C19orf68 SNAR-C4 KDELR1 SLC6A16 SNAR-A12 VRK3 MIR4324 AP2A1 MIR6798 SNAR-B2 DHDH PPFIA3 ADM5 CGB1 SNAR-A2 SNAR-A3 BCAT2 CCDC155 PTOV1 BSPH1 RPS11 PIH1D1 TBC1D17 CCDC114 PLA2G4C KCNA7 ZNF114 FUZ NUCB1-AS1 SNORD34 TRPM4 NUCB1 HRC FGF21 TSKS ALDH16A1 SIGLEC16 SNAR-A6 MIR4750 RPL18 CPT1C SNAR-A1 LOC105447645 PLEKHA4 DKKL1 BAX NTF4 DBP SPHK2 SCAF1 PRR12 GYS1 SNAR-A14 LHB LOC101928295 GRIN2D IRF3 FUT2 SNORD35B PTH2 TULP2 CGB8 PRMT1 CABP5 SIGLEC11 CARD8-AS1 SNORD35A C19orf73 CYTH2 LOC100287477 NOSIP SNRNP70 LIN7B HSD17B14 SNAR-C5 SNAR-C2 CA11 KCNJ14 PPP1R15A MIR4751 SEC1P SNAR-A7 BCL2L12 ATF5 LMTK3 SNAR-D MIR5088 MAMSTR EMP3 SNAR-A9 RUVBL2 PTOV1-AS1 MIR150 SNORD33 RRAS FLT3LG LOC105372430 CGB5 RCN3 FCGRT SNAR-G1 GFY SNAR-A13 PRRG2 FLJ26850 SULT2B1 NUP62 ZNF473 SNAR-A10 CGB2 RASIP1 IZUMO1 AKT1S1 SNAR-A4 SYNGR4 PTOV1-AS2 SLC17A7 FTL PNKP MIR4749 PLA2G4C-AS1 MED25 TEAD2 SNAR-G2 ELSPBP1 SPACA4 CGB3 FAM83E LOC101059948 MIR6800 GRWD1 CARD8 NTN5 MIR6799 CGB7 SNORD32A SNAR-C3 SNAR-A8 SNAR-A5 FUT1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	PLA2G4C PLA2G4C-AS1 CABP5 TMEM143 ZNF114 CARD8-AS1 EMP3 LIG1 ELSPBP1 C19orf68 KDELR1 SYNGR4 GRIN2D CARD8 CCDC114
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 CABP5 ELSPBP1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 CABP5 ELSPBP1
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	CABP5 SNAR-A13 SNAR-A2 SNAR-A3 SNAR-C1 ELSPBP1 LINC01595 CRX SNAR-C4 SNAR-C5 SNAR-A12 SNAR-C2 TPRX1 SULT2A1 SNAR-A1 BSPH1 SNAR-C3
nsv579900	Chr.19:48019612 - 48033524 on Build GRCh38	Loss	CABP5 ELSPBP1
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C PLA2G4C-AS1 CABP5 ELSPBP1
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 CABP5 SNAR-A13 SNAR-A2 SNAR-A3 SNAR-C1 ELSPBP1 LINC01595 CRX SNAR-C4 SNAR-C5 SNAR-A12 SNAR-C2 TPRX1 SULT2A1 SNAR-A1 BSPH1 SNAR-C3

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding