Hs04033984_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48029901 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4	6	1310	NP_062829.1
	XM_017026992.1	8	1511	XP_016882481.1
	BU734136.1	1	536

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	PLA2G4C C19orf68 PLA2G4C-AS1 ELSPBP1 LIG1 CABP5 BSPH1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	NTN5 NUCB1-AS1 DBP SNAR-C5 TBC1D17 PLA2G4C-AS1 FUT2 FLT3LG SNAR-A2 LOC100287477 SULT2B1 PPP1R15A KDELR1 CGB7 SNAR-A10 SNAR-G1 SIGLEC11 MAMSTR SNORD35B SNAR-A7 SNAR-C2 FLJ26850 FAM83E BAX FUT1 RPL13A PLEKHA4 SCAF1 RRAS SNAR-A11 CGB1 PRRG2 PIH1D1 ADM5 FUZ ZNF114 PTOV1 ELSPBP1 SNAR-C3 TSKS SNORD32A CARD8 SPHK2 LOC105372430 SNORD34 MIR150 SNAR-A13 MIR6798 CD37 SNAR-G2 CPT1C FTL MIR4749 PTOV1-AS2 CGB8 SNORD33 SNAR-A4 GRWD1 LOC101928295 PNKP AP2A1 SNORD35A LOC105447645 FGF21 SNAR-A9 CGB5 IRF3 HRC SIGLEC16 IZUMO1 RCN3 BCAT2 LIN7B MIR4324 SNAR-B1 FCGRT PLA2G4C TULP2 LOC101059948 PPFIA3 DHDH SEC1P SPACA4 NUP62 GRIN2D SYNGR4 IL4I1 CARD8-AS1 MIR4751 NTF4 SLC6A16 MIR6800 MIR4750 DKKL1 MED25 NUCB1 SNAR-A8 CYTH2 CABP5 PRMT1 CGB2 LIG1 ZNF473 SNAR-A3 RPL18 C19orf73 LMTK3 RUVBL2 GFY EMP3 CCDC114 SNAR-A12 KCNA7 TEAD2 TMEM143 ALDH16A1 MIR6799 SNAR-D CGB3 SNAR-A5 LHB HSD17B14 RPS11 SNAR-B2 KCNJ14 SNAR-C1 SNAR-A6 CCDC155 SNAR-A14 GYS1 PTOV1-AS1 CA11 SNAR-C4 SNRNP70 PTH2 PRR12 AKT1S1 C19orf68 RASIP1 MIR5088 NOSIP VRK3 SLC17A7 TRPM4 ATF5 BCL2L12 SNAR-A1 BSPH1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	EMP3 CCDC114 TMEM143 ZNF114 CABP5 PLA2G4C C19orf68 PLA2G4C-AS1 ELSPBP1 GRIN2D SYNGR4 CARD8-AS1 LIG1 CARD8 KDELR1
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	SNAR-A13 SNAR-C4 SNAR-A12 SNAR-C5 CABP5 SNAR-C2 TPRX1 SNAR-A2 ELSPBP1 SNAR-C3 CRX SNAR-C1 LINC01595 SNAR-A1 SNAR-A3 SULT2A1 BSPH1
nsv579900	Chr.19:48019612 - 48033524 on Build GRCh38	Loss	ELSPBP1 CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-A13 SNAR-C4 SNAR-A12 SNAR-C5 CABP5 PLA2G4C SNAR-C2 PLA2G4C-AS1 TPRX1 SNAR-A2 ELSPBP1 SNAR-C3 CRX SNAR-C1 LINC01595 SNAR-A1 SNAR-A3 SULT2A1 BSPH1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding