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See other RTEL1 CNV Assays ›
Gene Symbol
RTEL1
Assay Reference Genome
Location

Chr.20:63675280 on build GRCh38
Cytoband
20q13.33
Assay ID Hs04034415_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51750

Gene Name:

 regulator of telomere elongation helicase 1

Gene Aliases:

 C20orf41, DKCA4, DKCB5, NHL, PFBMFT3, RTEL

Location:

 Chr.20:63657810-63696253 on Build GRCh38

Assay Gene Location:

 Within Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTEL1 NM_001283009.1 NP_001269938.1
NM_001283010.1 NP_001269939.1
NM_016434.3 NP_057518.1
NM_032957.4 NP_116575.3
AF217795.1 AAF33687.1
AK299332.1
AK302508.1
AK304798.1
JX119186.1

Target Gene Details

Entrez Gene ID:

 100533107

Gene Name:

 RTEL1-TNFRSF6B readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.20:63657810-63698698 on Build GRCh38

Assay Gene Location:

 Within Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTEL1-TNFRSF6B NR_037882.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953308 Chr.20:63650148 - 63831847 on Build GRCh38 Deletion STMN3 RTEL1 ZGPAT RTEL1-TNFRSF6B SLC2A4RG ZBTB46 LIME1 ARFRP1 ZBTB46-AS1 TNFRSF6B
nsv1160690 Chr.20:63639552 - 63744287 on Build GRCh38 Deletion STMN3 RTEL1 ZGPAT RTEL1-TNFRSF6B SLC2A4RG ZBTB46 LIME1 ARFRP1 TNFRSF6B
nsv3449 Chr.20:63675224 - 63696622 on Build GRCh38 Insertion RTEL1 RTEL1-TNFRSF6B
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss OPRL1 MIR941-3 RTEL1 PCMTD2 ARFRP1 LKAAEAR1 MIR1914 ZBTB46-AS1 STMN3 RTEL1-TNFRSF6B SLC2A4RG MIR941-5 NPBWR2 TNFRSF6B DNAJC5 MIR941-2 LINC00176 RGS19 SAMD10 ZGPAT ZBTB46 C20orf181 TCEA2 MIR941-1 LOC100505771 TPD52L2 ABHD16B GMEB2 MIR647 MYT1 PRPF6 SOX18 UCKL1 ZNF512B LIME1 MIR6813 MIR941-4 UCKL1-AS1 LINC00266-1
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss HELZ2 RTEL1 ZGPAT ZBTB46 LOC100505771 ARFRP1 PTK6 GMEB2 STMN3 FNDC11 SRMS RTEL1-TNFRSF6B EEF1A2 SLC2A4RG LIME1 PPDPF TNFRSF6B
esv2762091 Chr.20:63674837 - 63675317 on Build GRCh38 Loss RTEL1 RTEL1-TNFRSF6B
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss HELZ2 KCNQ2 RTEL1 ZGPAT ZBTB46 LOC100505771 ARFRP1 PTK6 GMEB2 STMN3 FNDC11 SRMS RTEL1-TNFRSF6B EEF1A2 SLC2A4RG LIME1 PPDPF TNFRSF6B

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