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See other RTEL1 CNV Assays ›
Gene Symbol
RTEL1
Assay Reference Genome
Location

Chr.20:63663905 on build GRCh38
Cytoband
20q13.33
Assay ID Hs04047577_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51750

Gene Name:

 regulator of telomere elongation helicase 1

Gene Aliases:

 C20orf41, DKCA4, DKCB5, NHL, PFBMFT3, RTEL

Location:

 Chr.20:63657810-63696253 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTEL1 NM_001283009.1 NP_001269938.1
NM_001283010.1 NP_001269939.1
NM_016434.3 NP_057518.1
NM_032957.4 NP_116575.3
AF217795.1 AAF33687.1
AK299332.1
AK302508.1
AK304798.1
JX119186.1

Target Gene Details

Entrez Gene ID:

 100533107

Gene Name:

 RTEL1-TNFRSF6B readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.20:63657810-63698698 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTEL1-TNFRSF6B NR_037882.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953308 Chr.20:63650148 - 63831847 on Build GRCh38 Deletion STMN3 ZBTB46-AS1 ARFRP1 RTEL1-TNFRSF6B SLC2A4RG LIME1 RTEL1 TNFRSF6B ZGPAT ZBTB46
nsv1160690 Chr.20:63639552 - 63744287 on Build GRCh38 Deletion STMN3 ARFRP1 RTEL1-TNFRSF6B SLC2A4RG LIME1 RTEL1 TNFRSF6B ZGPAT ZBTB46
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss RGS19 OPRL1 UCKL1 ARFRP1 MIR1914 MYT1 RTEL1 UCKL1-AS1 NPBWR2 ZGPAT MIR941-1 STMN3 MIR941-2 DNAJC5 SAMD10 MIR647 RTEL1-TNFRSF6B ABHD16B C20orf181 LIME1 MIR6813 ZNF512B TPD52L2 MIR941-3 MIR941-5 SLC2A4RG LINC00266-1 LKAAEAR1 GMEB2 TNFRSF6B ZBTB46 PCMTD2 MIR941-4 LOC100505771 ZBTB46-AS1 SOX18 TCEA2 LINC00176 PRPF6
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss FNDC11 ARFRP1 SLC2A4RG RTEL1 PPDPF SRMS GMEB2 TNFRSF6B ZGPAT ZBTB46 STMN3 LOC100505771 RTEL1-TNFRSF6B LIME1 PTK6 HELZ2 EEF1A2
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss FNDC11 ARFRP1 SLC2A4RG RTEL1 PPDPF SRMS GMEB2 TNFRSF6B ZGPAT ZBTB46 STMN3 LOC100505771 RTEL1-TNFRSF6B LIME1 PTK6 HELZ2 EEF1A2 KCNQ2

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