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See other GUCD1 CNV Assays ›
Gene Symbol
GUCD1
Assay Reference Genome
Location

Chr.22:24545228 on build GRCh38
Cytoband
22q11.23
Assay ID Hs04088231_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 83606

Gene Name:

 guanylyl cyclase domain containing 1

Gene Aliases:

 C22orf13, LLN4

Location:

 Chr.22:24540423-24555935 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GUCD1 NM_001284251.1 NP_001271180.1
NM_001284252.1 NP_001271181.1
NM_001284253.1 NP_001271182.1
NM_001284254.1 NP_001271183.1
NM_001284255.1 NP_001271184.1
NM_001284256.1 NP_001271185.1
NM_001284257.1 NP_001271186.1
NM_031444.3 NP_113632.2
NR_104286.1
XM_005261761.1 XP_005261818.1
AK054681.1 BAB70791.1
AK098754.1
AK294972.1
AK296893.1
BC002924.2 AAH02924.2
BC053529.1 AAH53529.1
BC070109.1 AAH70109.1
BQ893876.1
BU153022.1
BX346077.2
DA033557.1
HY059446.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv8039n54 Chr.22:23323169 - 24601506 on Build GRCh38 Gain GSTTP1 SPECC1L-ADORA2A MIF-AS1 PCAT14 ADORA2A-AS1 DDT LOC101929374 CES5AP1 LOC100652871 SMARCB1 DERL3 MIF UPB1 POM121L9P VPREB3 LOC107985555 CHCHD10 ADORA2A C22orf15 IGLL1 LRRC75B SNRPD3 ZDHHC8P1 SUSD2 GSTT2B GSTT2 MMP11 DDTL RGL4 GUSBP11 LOC388882 LOC107985559 ZNF70 DRICH1 SPECC1L GUCD1 GGT1 SLC2A11 GGT5 CABIN1
esv2724068 Chr.22:24288741 - 24669870 on Build GRCh38 Deletion UPB1 SPECC1L-ADORA2A SNRPD3 SPECC1L ADORA2A-AS1 ADORA2A GUCD1 GGT1 POM121L10P BCRP3 LRRC75B
nsv1057819 Chr.22:24290518 - 24624081 on Build GRCh38 Gain UPB1 SPECC1L-ADORA2A SNRPD3 SPECC1L ADORA2A-AS1 ADORA2A GUCD1 GGT1 LRRC75B
esv2724041 Chr.22:23315914 - 24669376 on Build GRCh38 Deletion GSTTP1 SPECC1L-ADORA2A MIF-AS1 PCAT14 ADORA2A-AS1 DDT LOC101929374 CES5AP1 LOC100652871 SMARCB1 BCR DERL3 POM121L10P MIF UPB1 POM121L9P VPREB3 LOC107985555 CHCHD10 ADORA2A C22orf15 IGLL1 LRRC75B SNRPD3 ZDHHC8P1 SUSD2 GSTT2B GSTT2 MMP11 DDTL RGL4 GUSBP11 BCRP3 LOC388882 LOC107985559 ZNF70 DRICH1 SPECC1L GUCD1 GGT1 SLC2A11 GGT5 CABIN1
nsv526567 Chr.22:23348138 - 24600663 on Build GRCh38 Gain GSTTP1 SPECC1L-ADORA2A MIF-AS1 PCAT14 ADORA2A-AS1 DDT LOC101929374 CES5AP1 LOC100652871 SMARCB1 DERL3 MIF UPB1 POM121L9P VPREB3 LOC107985555 CHCHD10 ADORA2A C22orf15 IGLL1 LRRC75B SNRPD3 ZDHHC8P1 SUSD2 GSTT2B GSTT2 MMP11 DDTL RGL4 GUSBP11 LOC388882 LOC107985559 ZNF70 DRICH1 SPECC1L GUCD1 GGT1 SLC2A11 GGT5 CABIN1
nsv1055830 Chr.22:24005071 - 24643213 on Build GRCh38 Gain GSTTP1 SPECC1L-ADORA2A SNRPD3 SUSD2 ADORA2A-AS1 BCRP3 UPB1 POM121L9P SPECC1L ADORA2A GUCD1 GGT1 GGT5 CABIN1 LRRC75B
esv3893463 Chr.22:24009046 - 24601506 on Build GRCh38 Gain SPECC1L-ADORA2A SNRPD3 SUSD2 ADORA2A-AS1 UPB1 POM121L9P SPECC1L ADORA2A GUCD1 GGT1 GGT5 CABIN1 LRRC75B
dgv4528n100 Chr.22:23322244 - 24682765 on Build GRCh38 Gain GSTTP1 SPECC1L-ADORA2A MIF-AS1 PCAT14 ADORA2A-AS1 DDT LOC101929374 CES5AP1 LOC100652871 SMARCB1 DERL3 POM121L10P MIF UPB1 POM121L9P VPREB3 LOC107985555 CHCHD10 ADORA2A C22orf15 IGLL1 LRRC75B SNRPD3 ZDHHC8P1 SUSD2 GSTT2B GSTT2 MMP11 DDTL RGL4 GUSBP11 BCRP3 LOC388882 LOC107985559 ZNF70 DRICH1 SPECC1L GUCD1 GGT1 SLC2A11 GGT5 CABIN1
nsv588744 Chr.22:24285587 - 24617379 on Build GRCh38 Gain UPB1 SPECC1L-ADORA2A SNRPD3 SPECC1L ADORA2A-AS1 ADORA2A GUCD1 GGT1 LRRC75B
esv3575443 Chr.22:23348201 - 24670505 on Build GRCh38 Gain GSTTP1 SPECC1L-ADORA2A MIF-AS1 PCAT14 ADORA2A-AS1 DDT LOC101929374 CES5AP1 LOC100652871 SMARCB1 DERL3 POM121L10P MIF UPB1 POM121L9P VPREB3 LOC107985555 CHCHD10 ADORA2A C22orf15 IGLL1 LRRC75B SNRPD3 ZDHHC8P1 SUSD2 GSTT2B GSTT2 MMP11 DDTL RGL4 GUSBP11 BCRP3 LOC388882 LOC107985559 ZNF70 DRICH1 SPECC1L GUCD1 GGT1 SLC2A11 GGT5 CABIN1
nsv9884 Chr.22:24415625 - 24662249 on Build GRCh38 Gain+Loss UPB1 SPECC1L-ADORA2A SNRPD3 SPECC1L ADORA2A-AS1 ADORA2A GUCD1 GGT1 POM121L10P BCRP3 LRRC75B

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More Information


Additional Information:

For this assay, SNP(s) [rs115115477] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Process(es)


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