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Gene Symbol
MICAL3
Assay Reference Genome
Location

Chr.22:17790069 on build GRCh38
Cytoband
22q11.21
Assay ID Hs04094734_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57553

Gene Name:

 microtubule associated monooxygenase, calponin and LIM domain containing 3

Gene Aliases:

 MICAL-3

Location:

 Chr.22:17787649-18024559 on Build GRCh38

Assay Gene Location:

 Within Exon 50
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MICAL3 NM_015241.2 32 7025 NP_056056.2
XM_005261262.3 32 6855 XP_005261319.1
XM_011546137.2 40 7476 XP_011544439.1
XM_011546139.2 39 7425 XP_011544441.1
XM_011546142.2 38 7374 XP_011544444.1
XM_017028865.1 40 7994 XP_016884354.1
XM_017028866.1 40 7800 XP_016884355.1
XM_017028867.1 40 8917 XP_016884356.1
XM_017028868.1 40 7646 XP_016884357.1
XM_017028869.1 40 7391 XP_016884358.1
XM_017028870.1 40 7392 XP_016884359.1
XM_017028871.1 40 7473 XP_016884360.1
XM_017028872.1 39 7425 XP_016884361.1
XM_017028873.1 39 7413 XP_016884362.1
XM_017028874.1 39 7392 XP_016884363.1
XM_017028875.1 39 7368 XP_016884364.1
XM_017028876.1 39 7338 XP_016884365.1
XM_017028877.1 38 7275 XP_016884366.1
XM_017028878.1 37 7161 XP_016884367.1
XM_017028879.1 35 7020 XP_016884368.1
XM_017028880.1 35 7343 XP_016884369.1
XM_017028881.1 35 7190 XP_016884370.1
XM_017028882.1 34 6957 XP_016884371.1
XM_017028883.1 39 7139 XP_016884372.1
XM_017028884.1 36 7469 XP_016884373.1
XM_017028885.1 20 5061 XP_016884374.1
XM_017028886.1 20 4909 XP_016884375.1
AB020626.1 12 3633 BAA74842.1
AK126925.1 5 1911
BC006562.2 7 1799 AAH06562.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv526826 Chr.22:17411511 - 17836413 on Build GRCh38 Gain BID BCL2L13 CECR2 SLC25A18 LINC00528 MICAL3 LOC101929372 MIR3198-1 ATP6V1E1
nsv834120 Chr.22:17733890 - 17904438 on Build GRCh38 Loss BID LINC00528 MICAL3 MIR3198-1
esv3893428 Chr.22:17578563 - 18040448 on Build GRCh38 Loss BID BCL2L13 SLC25A18 FLJ41941 MIR648 LINC00528 MICAL3 LOC101929372 MIR3198-1 ATP6V1E1
nsv428385 Chr.22:17491941 - 18886703 on Build GRCh38 Gain+Loss LOC100996415 TUBA8 BID SLC25A18 FLJ41941 LOC101929372 ATP6V1E1 PI4KAP1 MIR648 LOC729461 TMEM191B RIMBP3 CECR2 LOC102725072 MICAL3 LOC642643 USP18 PEX26 GGT3P BCL2L13 LOC100996432 LINC00528 FAM230A LOC100996401 MIR3198-1
nsv834119 Chr.22:17665133 - 17795994 on Build GRCh38 Loss BID BCL2L13 LINC00528 MICAL3 MIR3198-1

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More Information


Additional Information:

For this assay, SNP(s) [rs115799933] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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