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See other LOC728989 CNV Assays ›
Gene Symbol
LOC728989
Assay Reference Genome
Location

Chr.1:147030893 on build GRCh38
Cytoband
1q21.1
Assay ID Hs04203759_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 728989

Gene Name:

 phosphodiesterase 4D interacting protein pseudogene

Gene Aliases:

 -

Location:

 Chr.1:147019336-147043039 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC728989 NR_024442.2
AK299984.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss MIR6736 LOC100996763 ANKRD34A ITGA10 CH17-408M7.1 LINC01138 PDIA3P1 POLR3GL LOC105371226 BCL9 NUDT4P2 HFE2 RNVU1-1 NUDT17 FMO5 CHD1L RNF115 NUDT4P1 NBPF10 ACP6 NOTCH2NL NBPF12 NBPF13P LOC105371242 RBM8A LIX1L LOC728989 GJA5 LOC101928979 HYDIN2 ANKRD35 GPR89B POLR3C GNRHR2 PRKAB2 NBPF14 GPR89A LOC100996517 PDE4DIP LINC00624 PIAS3 LOC101927468 MIR6077 PEX11B GJA8 LOC100132057 RNU1-13P MIR5087 PDZK1P1 NBPF11 RNVU1-6 LOC284561 RNVU1-8 PDZK1 LOC100505824 CD160 PPIAL4G RNVU1-7 TXNIP RNVU1-3
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain GPR89B LOC100996763 PRKAB2 CH17-408M7.1 LINC01138 PDIA3P1 LOC105371226 BCL9 NBPF14 NUDT4P2 LOC100996517 PDE4DIP LINC00624 RNVU1-1 LOC101927468 MIR6077 FMO5 GJA8 LOC100132057 CHD1L RNU1-13P MIR5087 PDZK1P1 NBPF11 RNVU1-6 LOC284561 NUDT4P1 NBPF10 ACP6 RNVU1-8 NOTCH2NL NBPF12 NBPF13P LOC100505824 LOC105371242 PPIAL4G LOC728989 GJA5 RNVU1-7 LOC101928979 HYDIN2 RNVU1-3
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss GPR89B LOC100996763 PRKAB2 CH17-408M7.1 LINC01138 PDIA3P1 LOC105371226 BCL9 NBPF14 NUDT4P2 LOC100996517 PDE4DIP LINC00624 RNVU1-1 LOC101927468 MIR6077 FMO5 GJA8 LOC100132057 CHD1L RNU1-13P MIR5087 PDZK1P1 NBPF11 LOC284561 NUDT4P1 NBPF10 ACP6 RNVU1-8 NOTCH2NL NBPF12 NBPF13P LOC100505824 LOC105371242 PPIAL4G LOC728989 GJA5 RNVU1-7 HYDIN2 RNVU1-3
nsv1077657 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion RNVU1-8 NBPF13P CHD1L LOC728989 PRKAB2 FMO5 PDIA3P1
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion GPR89B LOC100996763 ANKRD34A PRKAB2 CH17-408M7.1 LINC01138 PDIA3P1 POLR3GL LOC105371226 BCL9 NBPF14 NUDT4P2 LOC100996517 HFE2 PDE4DIP LINC00624 RNVU1-1 LOC101927468 MIR6077 FMO5 GJA8 LOC100132057 CHD1L RNU1-13P MIR5087 PDZK1P1 NBPF11 RNVU1-6 LOC284561 NUDT4P1 NBPF10 ACP6 RNVU1-8 NOTCH2NL NBPF12 NBPF13P LOC100505824 LOC105371242 PPIAL4G LIX1L LOC728989 GJA5 RNVU1-7 LOC101928979 HYDIN2 TXNIP RNVU1-3
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication GPR89B LOC100996763 PRKAB2 CH17-408M7.1 LINC01138 PDIA3P1 LOC105371226 BCL9 NBPF14 NUDT4P2 LOC100996517 PDE4DIP LINC00624 RNVU1-1 LOC101927468 MIR6077 FMO5 GJA8 LOC100132057 CHD1L RNU1-13P MIR5087 PDZK1P1 NBPF11 LOC284561 NUDT4P1 ACP6 RNVU1-8 NOTCH2NL NBPF12 NBPF13P LOC100505824 LOC105371242 PPIAL4G LOC728989 GJA5 RNVU1-7 HYDIN2 RNVU1-3
nsv946295 Chr.1:146987843 - 147036027 on Build GRCh38 Duplication NBPF12 LOC728989
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain GPR89B LOC100996763 PRKAB2 CH17-408M7.1 LINC01138 PDIA3P1 LOC105371226 BCL9 NBPF14 NUDT4P2 LOC100996517 PDE4DIP LINC00624 RNVU1-1 LOC101927468 MIR6077 FMO5 GJA8 LOC100132057 CHD1L RNU1-13P MIR5087 PDZK1P1 NBPF11 RNVU1-6 LOC284561 NUDT4P1 NBPF10 ACP6 RNVU1-8 NOTCH2NL NBPF12 NBPF13P LOC100505824 LOC105371242 PPIAL4G LOC728989 GJA5 RNVU1-7 LOC101928979 HYDIN2 RNVU1-3
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion GPR89B LOC100996763 PRKAB2 CH17-408M7.1 LINC01138 PDIA3P1 LOC105371226 BCL9 NBPF14 NUDT4P2 LOC100996517 PDE4DIP LINC00624 RNVU1-1 LOC101927468 MIR6077 FMO5 GJA8 LOC100132057 CHD1L RNU1-13P MIR5087 PDZK1P1 NBPF11 LOC284561 NUDT4P1 NBPF10 ACP6 RNVU1-8 NOTCH2NL NBPF9 NBPF12 NBPF13P LOC100505824 LOC105371242 PPIAL4G LOC728989 GJA5 RNVU1-7 LOC101928979 HYDIN2 RNVU1-3

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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