Hs04214004_cn

• Gene Symbol: PLA2G2C
• Assay Reference Genome Location: Chr.1:20172696 on build GRCh38
• Cytoband: 1p36.12

Target Gene Details

• Entrez Gene ID: 391013
• Gene Name: phospholipase A2 group IIC
• Gene Aliases: -
• Location: Chr.1:20163085-20177364 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PLA2G2C	NM_001316722.1			NP_001303651.1
	XM_017001270.1			XP_016856759.1
	AW135717.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2674003	Chr.1:20172236 - 20174073 on Build GRCh38	Deletion	PLA2G2C
esv26309	Chr.1:20172511 - 20174305 on Build GRCh38	Loss	PLA2G2C
esv3585417	Chr.1:20172265 - 20174165 on Build GRCh38	Loss	PLA2G2C
nsv545731	Chr.1:19989106 - 20776306 on Build GRCh38	Gain	KIF17 DDOST UBXN10-AS1 FAM43B CDA UBXN10 PINK1 VWA5B1 PINK1-AS MIR6084 HP1BP3 CAMK2N1 PLA2G2F LINC01141 SH2D5 PLA2G5 MUL1 PLA2G2D PLA2G2C

More Information

Additional Information:

For this assay, SNP(s) [rs114411177] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

phospholipase

Gene Ontology Categories:

Process(es)

lipid catabolic process

Function(s)

calcium ion binding