Hs04364889_cn

• Gene Symbol: EGFL7
• Assay Reference Genome Location: Chr.9:136656424 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 51162
• Gene Name: EGF like domain multiple 7
• Gene Aliases: NEU1, VE-STATIN, ZNEU1
• Location: Chr.9:136654753-136672678 on Build GRCh38
• Assay Gene Location:

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EGFL7

Target Gene Details

• Entrez Gene ID: 101928612
• Gene Name: uncharacterized LOC101928612
• Gene Aliases: -
• Location: Chr.9:136648610-136660421 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HSPC324	NR_135132.1
	AF161442.1			AAF29002.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv13005n54	Chr.9:136605258 - 136696482 on Build GRCh38	Loss	LINC01451 MIR126 HSPC324 AGPAT2 EGFL7
nsv509334	Chr.9:136514168 - 136724663 on Build GRCh38	Insertion	MIR4674 LINC01451 SNHG7 MIR126 HSPC324 AGPAT2 MIR4673 EGFL7 NALT1 FAM69B NOTCH1
nsv951203	Chr.9:136562849 - 136770848 on Build GRCh38	Deletion	SNORA17B LCN10 LOC100128593 MIR126 AGPAT2 EGFL7 LCN8 MIR6722 LINC01451 SNORA17A SNHG7 LCN6 HSPC324 LCN15 FAM69B
nsv469918	Chr.9:136359865 - 137173890 on Build GRCh38	Loss	LCN10 CARD9 TMEM141 DPP7 EGFL7 C9orf142 ABCA2 MAMDC4 LINC01451 SNORA17A FBXW5 PRR31 HSPC324 LOC101930307 NOTCH1 SNAPC4 LRRC26 C9orf163 FUT7 LOC100128593 MIR126 MAN1B1 C8G C9orf139 C9orf172 LCN15 SNORA17B CCDC183-AS1 LCNL1 CLIC3 ENTPD2 RABL6 PHPT1 SEC16A MIR3621 PMPCA LCN8 MIR6722 GRIN1 MIR4674 SNHG7 LCN6 NALT1 UAP1L1 EDF1 FAM69B INPP5E MAN1B1-AS1 TRAF2 CCDC183 SDCCAG3 AGPAT2 MIR4479 SAPCD2 MIR4292 DNLZ LCN12 TMEM210 NPDC1 MIR4673 PTGDS
esv2759720	Chr.9:136356377 - 136932033 on Build GRCh38	Loss	SNORA17B LCN10 CARD9 CCDC183-AS1 TMEM141 EGFL7 RABL6 PHPT1 SEC16A PMPCA MAMDC4 LCN8 MIR6722 MIR4674 LINC01451 SNORA17A SNHG7 LCN6 HSPC324 NALT1 EDF1 FAM69B NOTCH1 SNAPC4 INPP5E C9orf163 TRAF2 LOC100128593 CCDC183 MIR126 SDCCAG3 AGPAT2 MIR4479 MIR4292 DNLZ MIR4673 C9orf172 LCN15 GPSM1
nsv8579	Chr.9:136505432 - 136760256 on Build GRCh38	Gain	SNORA17B LCN10 LOC100128593 MIR126 AGPAT2 EGFL7 LCN8 MIR6722 MIR4674 LINC01451 SNORA17A SNHG7 LCN6 HSPC324 MIR4673 NALT1 LCN15 FAM69B NOTCH1
nsv615971	Chr.9:136583078 - 136670216 on Build GRCh38	Loss	LINC01451 HSPC324 EGFL7
nsv1053781	Chr.9:136590694 - 136722927 on Build GRCh38	Gain	LINC01451 MIR126 HSPC324 AGPAT2 EGFL7 FAM69B
dgv957n27	Chr.9:136619086 - 136725859 on Build GRCh38	Loss	SNHG7 MIR126 HSPC324 AGPAT2 EGFL7 FAM69B
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	RNF224 LCN10 NELFB TMEM141 DPP7 EGFL7 C9orf142 ABCA2 TUBB4B MAMDC4 LINC01451 ANAPC2 SNORA17A FBXW5 PRR31 NRARP HSPC324 LOC101930307 SSNA1 LRRC26 FUT7 LOC100128593 MIR126 MAN1B1 STPG3 TPRN C8G C9orf139 C9orf172 LCN15 TOR4A SLC34A3 SNORA17B CCDC183-AS1 LCNL1 CLIC3 ENTPD2 RABL6 PHPT1 RNF208 MIR3621 LCN8 MIR6722 GRIN1 SNHG7 LCN6 EXD3 UAP1L1 EDF1 FAM69B C9orf173-AS1 MAN1B1-AS1 TRAF2 CCDC183 AGPAT2 FAM166A CYSRT1 MIR4479 SAPCD2 MIR4292 NDOR1 LCN12 TMEM210 NPDC1 TMEM203 PTGDS

More Information

Additional Information:

For this assay, SNP(s) [rs79218093] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation