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Gene Symbol
PIDD1
Assay Reference Genome
Location

Chr.11:801666 on build GRCh38
Cytoband
11p15.5
Assay ID Hs04401877_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 55367

Gene Name:

 p53-induced death domain protein 1

Gene Aliases:

 LRDD, PIDD

Location:

 Chr.11:799179-809504 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIDD1 NM_145886.3 NP_665893.2
NM_145887.3 NP_665894.2
XM_005253005.4 XP_005253062.1
XM_005253006.4 XP_005253063.1
XM_005253007.3 XP_005253064.1
XM_005253008.4 XP_005253065.1
XM_011520209.2 XP_011518511.1
XM_011520210.2 XP_011518512.1
XM_011520211.2 XP_011518513.1
XM_011520212.1 XP_011518514.1
XM_011520213.2 XP_011518515.1
XM_017017993.1 XP_016873482.1
AB208832.1 BAD92069.1
AB208949.1 5 2516 BAD92186.1
AB209529.1 BAD92766.1
AF229178.1 AAF69491.1
AF274972.1 AAG13461.1
AF465246.1 AAP97716.1
AK074893.1 BAC11272.1
AL833849.1 CAD38708.1
BC014904.1 AAH14904.1
BQ924290.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss PIDD1 PDDC1 SLC25A22 SNORA52 PNPLA2 TSPAN4 POLR2L CD151 CRACR2B RPLP2 CHID1 LOC171391 CEND1 PANO1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss TALDO1 MUC2 LOC143666 LOC101927503 TSPAN4 AP2A2 IRF7 TOLLIP MIR210 CDHR5 CRACR2B CHID1 MIR210HG SCT RNH1 LMNTD2 LRRC56 PKP3 B4GALNT4 RASSF7 DEAF1 SIGIRR PIDD1 PDDC1 SLC25A22 SNORA52 MIR6744 PNPLA2 EPS8L2 POLR2L MUC6 PHRF1 CD151 DRD4 ANO9 RPLP2 LOC171391 HRAS MUC5B CEND1 TMEM80 PANO1 MUC5AC PTDSS2 LOC101059906
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain PIDD1 PDDC1 SLC25A22 SNORA52 PNPLA2 TSPAN4 AP2A2 POLR2L CD151 CRACR2B RPLP2 CHID1 LOC171391 CEND1 PANO1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss TALDO1 MUC2 LOC143666 LOC101927503 TSPAN4 AP2A2 IRF7 TOLLIP MIR210 CDHR5 CRACR2B CHID1 TOLLIP-AS1 MIR210HG SCT RNH1 LMNTD2 LRRC56 RASSF7 DEAF1 SIGIRR PIDD1 PDDC1 SLC25A22 SNORA52 MIR6744 PNPLA2 EPS8L2 POLR2L MUC6 PHRF1 CD151 DRD4 ANO9 RPLP2 LOC171391 HRAS MUC5B CEND1 TMEM80 PANO1 MUC5AC PTDSS2 LOC101059906
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion TALDO1 LOC143666 TSPAN4 AP2A2 IRF7 MIR210 CDHR5 CRACR2B CHID1 MIR210HG SCT RNH1 LMNTD2 LRRC56 PKP3 B4GALNT4 RASSF7 DEAF1 SIGIRR PIDD1 PDDC1 SLC25A22 SNORA52 PNPLA2 EPS8L2 POLR2L PHRF1 CD151 DRD4 ANO9 RPLP2 LOC171391 HRAS CEND1 TMEM80 PANO1 PTDSS2 LOC101059906
nsv552870 Chr.11:743813 - 810882 on Build GRCh38 Loss TALDO1 PIDD1 RPLP2 LOC171391 PDDC1 SLC25A22 CEND1 PANO1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss PIDD1 PDDC1 SLC25A22 SNORA52 PNPLA2 TSPAN4 POLR2L CD151 CRACR2B RPLP2 CHID1 LOC171391 CEND1 PANO1
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain CD151 PIDD1 CRACR2B RPLP2 LOC171391 PDDC1 SLC25A22 SNORA52 PNPLA2 CEND1 PANO1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion TALDO1 LOC143666 TSPAN4 IRF7 MIR210 CDHR5 CRACR2B CHID1 MIR210HG SCT RNH1 LMNTD2 LRRC56 RASSF7 DEAF1 PIDD1 PDDC1 SLC25A22 SNORA52 PNPLA2 EPS8L2 POLR2L PHRF1 CD151 DRD4 RPLP2 LOC171391 HRAS CEND1 TMEM80 PANO1 PTDSS2 LOC101059906
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion TALDO1 PIDD1 PDDC1 SLC25A22 SNORA52 PNPLA2 TSPAN4 POLR2L CD151 CRACR2B RPLP2 CHID1 LOC171391 CEND1 PANO1

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More Information


Additional Information:

For this assay, SNP(s) [rs200835870] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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