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Gene Symbol
PIDD1
Assay Reference Genome
Location

Chr.11:801666 on build GRCh38
Cytoband
11p15.5
Assay ID Hs04401877_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 55367

Gene Name:

 p53-induced death domain protein 1

Gene Aliases:

 LRDD, PIDD

Location:

 Chr.11:799179-809504 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIDD1 NM_145886.3 NP_665893.2
NM_145887.3 NP_665894.2
XM_005253005.4 XP_005253062.1
XM_005253006.4 XP_005253063.1
XM_005253007.3 XP_005253064.1
XM_005253008.4 XP_005253065.1
XM_011520209.2 XP_011518511.1
XM_011520210.2 XP_011518512.1
XM_011520211.2 XP_011518513.1
XM_011520212.1 XP_011518514.1
XM_011520213.2 XP_011518515.1
XM_017017993.1 XP_016873482.1
AB208832.1 BAD92069.1
AB208949.1 5 2516 BAD92186.1
AB209529.1 BAD92766.1
AF229178.1 AAF69491.1
AF274972.1 AAG13461.1
AF465246.1 AAP97716.1
AK074893.1 BAC11272.1
AL833849.1 CAD38708.1
BC014904.1 AAH14904.1
BQ924290.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss CEND1 PANO1 LOC171391 CRACR2B PIDD1 SLC25A22 CHID1 CD151 POLR2L SNORA52 PNPLA2 TSPAN4 PDDC1 RPLP2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss IRF7 DRD4 PANO1 PHRF1 MIR6744 MIR210 RASSF7 CD151 AP2A2 MUC5B LMNTD2 PNPLA2 LRRC56 PKP3 MIR210HG B4GALNT4 TMEM80 MUC2 ANO9 SCT CDHR5 CEND1 LOC171391 CRACR2B LOC143666 PIDD1 TALDO1 MUC5AC TOLLIP MUC6 HRAS SLC25A22 CHID1 SIGIRR RNH1 POLR2L SNORA52 EPS8L2 LOC101927503 DEAF1 LOC101059906 TSPAN4 PTDSS2 PDDC1 RPLP2
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CEND1 PANO1 LOC171391 CRACR2B PIDD1 SLC25A22 CHID1 CD151 AP2A2 POLR2L SNORA52 PNPLA2 TSPAN4 PDDC1 RPLP2
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss IRF7 DRD4 PANO1 PHRF1 TOLLIP-AS1 MIR6744 MIR210 RASSF7 CD151 AP2A2 MUC5B LMNTD2 PNPLA2 LRRC56 MIR210HG TMEM80 MUC2 ANO9 SCT CDHR5 CEND1 LOC171391 CRACR2B LOC143666 PIDD1 TALDO1 MUC5AC TOLLIP MUC6 HRAS SLC25A22 CHID1 SIGIRR RNH1 POLR2L SNORA52 EPS8L2 LOC101927503 DEAF1 LOC101059906 TSPAN4 PTDSS2 PDDC1 RPLP2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CEND1 PANO1 LOC171391 CRACR2B PIDD1 SLC25A22 CHID1 CD151 POLR2L SNORA52 PNPLA2 TSPAN4 PDDC1 RPLP2
nsv552870 Chr.11:743813 - 810882 on Build GRCh38 Loss CEND1 PANO1 LOC171391 PIDD1 TALDO1 SLC25A22 PDDC1 RPLP2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion IRF7 DRD4 PANO1 PHRF1 MIR210 RASSF7 CD151 AP2A2 LMNTD2 PNPLA2 LRRC56 PKP3 MIR210HG B4GALNT4 TMEM80 ANO9 SCT CDHR5 CEND1 LOC171391 CRACR2B LOC143666 PIDD1 TALDO1 HRAS SLC25A22 CHID1 SIGIRR RNH1 POLR2L SNORA52 EPS8L2 DEAF1 LOC101059906 TSPAN4 PTDSS2 PDDC1 RPLP2
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain SNORA52 CEND1 PANO1 LOC171391 CRACR2B PNPLA2 PIDD1 SLC25A22 CD151 PDDC1 RPLP2
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion IRF7 DRD4 PANO1 PHRF1 MIR210 RASSF7 CD151 LMNTD2 PNPLA2 LRRC56 MIR210HG TMEM80 SCT CDHR5 CEND1 LOC171391 CRACR2B LOC143666 PIDD1 TALDO1 HRAS SLC25A22 CHID1 RNH1 POLR2L SNORA52 EPS8L2 DEAF1 LOC101059906 TSPAN4 PTDSS2 PDDC1 RPLP2
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CEND1 PANO1 LOC171391 CRACR2B PIDD1 TALDO1 SLC25A22 CHID1 CD151 POLR2L SNORA52 PNPLA2 TSPAN4 PDDC1 RPLP2

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More Information


Additional Information:

For this assay, SNP(s) [rs200835870] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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