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See other BANP CNV Assays ›
Gene Symbol
BANP
Assay Reference Genome
Location

Chr.16:87972663 on build GRCh38
Cytoband
16q24.2
Assay ID Hs04457453_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 54971

Gene Name:

 BTG3 associated nuclear protein

Gene Aliases:

 BEND1, SMAR1, SMARBP1

Location:

 Chr.16:87949216-88077318 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BANP NM_001173539.1 NP_001167010.1
NM_001173540.1 NP_001167011.1
NM_001173541.1 NP_001167012.1
NM_001173542.1 NP_001167013.1
NM_001173543.1 NP_001167014.1
NM_017869.3 NP_060339.2
NM_079837.2 NP_524576.2
XM_005256008.3 XP_005256065.1
XM_005256009.3 XP_005256066.1
XM_011523170.2 XP_011521472.1
XM_011523172.2 XP_011521474.1
XM_011523174.2 XP_011521476.1
XM_011523175.2 XP_011521477.1
XM_011523176.2 XP_011521478.1
XM_011523177.2 XP_011521479.1
XM_011523178.2 XP_011521480.1
XM_011523179.2 XP_011521481.1
XM_011523180.2 XP_011521482.1
XM_011523181.2 XP_011521483.1
XM_011523182.1 XP_011521484.1
XM_011523183.2 XP_011521485.1
XM_011523184.2 XP_011521486.1
XM_017023378.1 XP_016878867.1
XM_017023379.1 XP_016878868.1
XM_017023380.1 XP_016878869.1
XM_017023381.1 XP_016878870.1
XM_017023383.1 XP_016878872.1
AK001039.1
AK094158.1 BAC04296.1
AK125232.1
AK293472.1
AK297945.1
AK315089.1
AK315535.1
BC009424.1 AAH09424.1
DA632793.1
T49823.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1059786 Chr.16:87811419 - 88019505 on Build GRCh38 Gain MIR6775 BANP SLC7A5 LOC107987237 CA5A
nsv1919 Chr.16:87963774 - 87979608 on Build GRCh38 Deletion BANP
esv2758668 Chr.16:87885744 - 88080126 on Build GRCh38 Loss BANP CA5A
esv3892935 Chr.16:87808912 - 88010269 on Build GRCh38 Loss MIR6775 BANP SLC7A5 LOC107987237 CA5A
nsv1066924 Chr.16:87911850 - 87998507 on Build GRCh38 Loss BANP CA5A
dgv36n68 Chr.16:87801736 - 87983550 on Build GRCh38 Loss MIR6775 BANP SLC7A5 LOC107987237 CA5A
nsv1062946 Chr.16:87635801 - 88019505 on Build GRCh38 Gain MIR6775 BANP SLC7A5 KLHDC4 LOC107987237 LOC105371397 LOC100129215 JPH3 CA5A LOC102724467

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More Information


Additional Information:

For this assay, SNP(s) [rs74994929] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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