Genomic Map
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Target Gene Details
Entrez Gene ID: | 102466864 |
Gene Name: | microRNA 6516 |
Gene Aliases: |
hsa-mir-6516 |
Location: |
Chr.17:77089417-77089497 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| MIR6516 | NR_106997.1 |
Target Gene Details
Entrez Gene ID: | 677781 |
Gene Name: | small Cajal body-specific RNA 16 |
Gene Aliases: |
ACA47 |
Location: |
Chr.17:77089307-77089493 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SCARNA16 | NR_003013.1 | |||
| AJ609486.1 |
Target Gene Details
Entrez Gene ID: | 6397 |
Gene Name: | SEC14 like lipid binding 1 |
Gene Aliases: |
PRELID4A, SEC14L |
Location: |
Chr.17:77088643-77217101 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SEC14L1 | NM_001204408.1 | NP_001191337.1 | ||
| NM_001204410.1 | NP_001191339.1 | |||
| FM995495.1 | ||||
| FM995496.1 | ||||
| FM995497.1 | ||||
| FM995498.1 | ||||
| FN357114.1 | ||||
| FN357120.1 |
Target Gene Details
Entrez Gene ID: | 654434 |
Gene Name: | small nucleolar RNA host gene 20 |
Gene Aliases: |
C17orf86, LINC00338, NCRNA00338, SCARNA16HG |
Location: |
Chr.17:77088643-77094986 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SNHG20 | NR_027058.1 | |||
| AF130050.1 | AAG35478.1 | |||
| BX648413.1 | ||||
| DA068554.1 | ||||
| DA916381.1 | ||||
| FN357113.1 | ||||
| FN357115.1 | ||||
| FN357116.1 | ||||
| FN357117.1 | ||||
| FN357118.1 | ||||
| FN357119.1 | ||||
| FN357121.1 | ||||
| FN357122.1 | ||||
| FN357123.1 | ||||
| FN357124.1 | ||||
| FN357125.1 | ||||
| FN357126.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv5784n54 | Chr.17:77049144 - 77101828 on Build GRCh38 | Gain |
 MIR6516
SEC14L1
SNHG20
SCARNA16
|
| esv3641304 | Chr.17:77065524 - 77180984 on Build GRCh38 | Gain |
MIR6516
SEC14L1
SNHG20
SCARNA16
|
| esv3582914 | Chr.17:77086710 - 77091639 on Build GRCh38 | Loss |
MIR6516
SEC14L1
SNHG20
SCARNA16
|
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Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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