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See other CCL16 CNV Assays ›
Gene Symbol
CCL16
Assay Reference Genome
Location

Chr.17:35983270 on build GRCh38
Cytoband
17q12
Assay ID Hs04468568_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6360

Gene Name:

 C-C motif chemokine ligand 16

Gene Aliases:

 CKb12, HCC-4, ILINCK, LCC-1, LEC, LMC, Mtn-1, NCC-4, NCC4, SCYA16, SCYL4

Location:

 Chr.17:35976493-35983620 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CCL16 XM_005258020.4 XP_005258077.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1059795 Chr.17:35828724 - 36157706 on Build GRCh38 Gain CCL16 TAF15 CCL3 CCL15-CCL14 CCL14 HEATR9 RDM1 CCL4 CCL18 LYZL6 CCL15 CCL5 LOC101927339 LRRC37A8P CCL23
nsv833427 Chr.17:35958281 - 36115227 on Build GRCh38 Loss CCL18 CCL15 CCL16 CCL3 LOC101927339 CCL15-CCL14 CCL14 CCL4 CCL23
nsv833424 Chr.17:35911883 - 36092128 on Build GRCh38 Gain CCL18 LYZL6 CCL15 CCL16 CCL3 LOC101927339 CCL15-CCL14 CCL14 RDM1 CCL23

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More Information


Additional Information:

For this assay, SNP(s) [rs76190126] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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