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See other PDE6G CNV Assays ›
Gene Symbol
PDE6G
Assay Reference Genome
Location

Chr.17:81660505 on build GRCh38
Cytoband
17q25.3
Assay ID Hs04472427_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
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4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 5148

Gene Name:

 phosphodiesterase 6G

Gene Aliases:

 PDEG, RP57

Location:

 Chr.17:81650459-81663418 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PDE6G XM_017024734.1 XP_016880223.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv26223 Chr.17:80659041 - 81736487 on Build GRCh38 Gain+Loss MIR338 TSPAN10 AATK-AS1 LOC100130370 SLC38A10 ARL16 LOC107985022 TMEM105 MRPL12 CHMP6 RPTOR MIR4740 MIR1250 MIR657 LINC00482 BAIAP2 PDE6G MIR3186 OXLD1 AATK FAAP100 BAHCC1 BAIAP2-AS1 C17orf89 LOC105371921 FSCN2 LOC105371925 LOC100129503 NPLOC4 LOC101928855 TEPSIN ACTG1 MIR6786 CEP131 LOC400627 SLC25A10 LOC107985021 CCDC137 MIR3065 HGS
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain TSPAN10 MCRIP1 SLC16A3 AATK-AS1 STRA13 FASN P4HB ASPSCR1 LOC100130370 SLC38A10 MIR6787 TMEM105 ANAPC11 TBCD RAB40B MAFG-AS1 PDE6G MIR3186 AATK FAAP100 BAHCC1 PCYT2 GCGR C17orf89 PYCR1 RFNG CD7 LOC105371925 PPP1R27 MAFG OGFOD3 NPLOC4 ACTG1 CEP131 HEXDC CCDC137 FN3KRP LRRC45 SNORD134 NOTUM WDR45B ZNF750 DUS1L DCXR LOC105371944 FOXK2 ARL16 GPS1 LOC105376791 FN3K SECTM1 MRPL12 MIR4740 ARHGDIA NPB LINC00482 OXLD1 SIRT7 UTS2R CCDC57 B3GNTL1 MYADML2 RAC3 TEX19 FSCN2 ALYREF LOC105376790 CSNK1D TEPSIN MIR6786 C17orf62 LOC101929511 SLC25A10 HGS LOC101929552 MIR4525 NARF
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss TSPAN10 MCRIP1 STRA13 DUS1L DCXR P4HB ASPSCR1 ARL16 GPS1 ANAPC11 MRPL12 ARHGDIA NPB MAFG-AS1 PDE6G OXLD1 SIRT7 FAAP100 MYADML2 PCYT2 RAC3 GCGR PYCR1 RFNG FSCN2 PPP1R27 ALYREF MAFG NPLOC4 MIR6786 SLC25A10 CCDC137 LRRC45 NOTUM HGS
nsv952390 Chr.17:81637175 - 81860124 on Build GRCh38 Deletion TSPAN10 MCRIP1 GCGR P4HB ARL16 PPP1R27 MRPL12 MIR6786 SLC25A10 CCDC137 HGS PDE6G OXLD1

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More Information


Additional Information:

For this assay, SNP(s) [rs68177983] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

phosphodiesterase

Gene Ontology Categories:

Function(s) Process(es)


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