Hs04483713_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48040135 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	LIG1 CABP5 BSPH1 PLA2G4C-AS1 C19orf68 PLA2G4C ELSPBP1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SNAR-G2 CD37 HRC PLEKHA4 ATF5 DHDH LOC101928295 RPL13A CGB2 FGF21 SNRNP70 MIR4749 PRR12 SNAR-A3 CGB5 SULT2B1 PRMT1 RRAS FAM83E MIR6798 CCDC114 IL4I1 SNAR-A4 MIR6800 CARD8-AS1 EMP3 SNAR-B1 RCN3 MIR5088 GYS1 TBC1D17 ALDH16A1 PNKP VRK3 KDELR1 PLA2G4C-AS1 RPL18 FUZ SNAR-G1 GRIN2D GFY CARD8 SNAR-A1 CCDC155 NUCB1 SNORD35A SNAR-C5 SNORD35B BCAT2 PIH1D1 SEC1P SPACA4 IRF3 KCNJ14 TULP2 FCGRT MIR6799 SCAF1 CABP5 NTN5 FUT2 MIR4324 SNAR-A2 CGB3 FUT1 ZNF114 SNAR-A7 AP2A1 CGB8 PLA2G4C TRPM4 CGB7 KCNA7 ELSPBP1 BAX AKT1S1 LOC105372430 PTH2 PPFIA3 MIR150 SNAR-C2 PTOV1 SYNGR4 MIR4750 SNAR-B2 CPT1C SNORD34 SNAR-A8 SNAR-C1 ZNF473 TEAD2 C19orf68 FLT3LG CYTH2 SNORD32A FTL ADM5 C19orf73 SNAR-A10 LOC100287477 PTOV1-AS2 SNAR-C4 MAMSTR SPHK2 SIGLEC11 CA11 GRWD1 LOC105447645 PRRG2 LIN7B SNORD33 SNAR-D SNAR-A13 LOC101059948 SNAR-A11 BSPH1 SNAR-A6 SLC6A16 LHB TSKS SNAR-A5 RASIP1 SIGLEC16 SNAR-A12 PPP1R15A DKKL1 FLJ26850 LIG1 LMTK3 DBP NOSIP NTF4 MIR4751 CGB1 TMEM143 IZUMO1 NUP62 SNAR-A14 SNAR-C3 SNAR-A9 BCL2L12 RPS11 HSD17B14 NUCB1-AS1 RUVBL2 PTOV1-AS1 MED25 SLC17A7
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CARD8-AS1 TMEM143 ZNF114 EMP3 C19orf68 PLA2G4C ELSPBP1 LIG1 CABP5 KDELR1 PLA2G4C-AS1 GRIN2D SYNGR4 CARD8 CCDC114
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	CABP5 PLA2G4C-AS1 PLA2G4C ELSPBP1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	CABP5 PLA2G4C-AS1 PLA2G4C ELSPBP1
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	CABP5 PLA2G4C-AS1 PLA2G4C ELSPBP1
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-A1 SNAR-A13 SNAR-A2 BSPH1 SNAR-C1 CRX SNAR-C4 SNAR-C5 PLA2G4C ELSPBP1 SNAR-A12 SULT2A1 SNAR-C3 LINC01595 TPRX1 CABP5 SNAR-A3 PLA2G4C-AS1 SNAR-C2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding