Hs04483713_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48040135 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	PLA2G4C LIG1 C19orf68 ELSPBP1 CABP5 PLA2G4C-AS1 BSPH1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	GFY SEC1P RCN3 PTOV1 NUCB1-AS1 C19orf73 LIN7B SPHK2 FUZ FUT1 PLEKHA4 KCNJ14 CARD8 DKKL1 CD37 IRF3 SNAR-A8 SNAR-B1 SNAR-G1 FLT3LG CGB7 MIR4324 LHB LOC105372430 PRMT1 SNAR-C5 NTN5 FTL MIR5088 SNAR-A9 PTOV1-AS2 HRC CARD8-AS1 CPT1C SIGLEC11 MIR4749 CCDC114 NUCB1 ZNF114 LOC101928295 SNRNP70 PIH1D1 FAM83E MIR6798 LMTK3 GRIN2D SNAR-A4 NUP62 CGB2 SNAR-C4 CGB5 RPL18 PTH2 TULP2 RASIP1 LOC100287477 SNAR-A5 SNAR-A12 SNAR-A2 SNORD35B MIR150 FUT2 ALDH16A1 PRR12 IL4I1 SNAR-A14 PRRG2 SNAR-A6 CGB3 ADM5 CABP5 PLA2G4C-AS1 GYS1 BCL2L12 FLJ26850 TEAD2 DHDH ELSPBP1 CCDC155 SYNGR4 MIR4751 PPP1R15A PTOV1-AS1 BCAT2 MIR6800 AP2A1 MAMSTR RRAS SNAR-A1 SULT2B1 DBP TRPM4 RPL13A LIG1 SNAR-C2 SNORD35A NOSIP SNAR-C1 EMP3 SNAR-A10 SNAR-D SNAR-A3 ZNF473 SNORD33 IZUMO1 RUVBL2 PPFIA3 MED25 AKT1S1 RPS11 NTF4 SNAR-C3 LOC101059948 SNORD32A GRWD1 TMEM143 SNAR-A13 CGB1 CGB8 SCAF1 CYTH2 FGF21 KCNA7 SPACA4 FCGRT VRK3 HSD17B14 SIGLEC16 MIR6799 BSPH1 LOC105447645 PNKP SNAR-G2 SNORD34 BAX SNAR-A11 SLC17A7 CA11 TSKS SNAR-B2 KDELR1 PLA2G4C ATF5 C19orf68 SLC6A16 SNAR-A7 TBC1D17 MIR4750
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	PLA2G4C ELSPBP1 CABP5 PLA2G4C-AS1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CARD8-AS1 CCDC114 LIG1 ELSPBP1 ZNF114 SYNGR4 TMEM143 EMP3 KDELR1 PLA2G4C C19orf68 GRIN2D CARD8 CABP5 PLA2G4C-AS1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C ELSPBP1 CABP5 PLA2G4C-AS1
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C ELSPBP1 CABP5 PLA2G4C-AS1
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-C4 LINC01595 SNAR-C3 ELSPBP1 SNAR-C2 SNAR-A12 SNAR-A13 SNAR-C1 SNAR-A2 TPRX1 CRX PLA2G4C SNAR-A3 SNAR-C5 SNAR-A1 CABP5 PLA2G4C-AS1 BSPH1 SULT2A1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding