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See other SLC6A1 CNV Assays ›
Gene Symbol
SLC6A1
Assay Reference Genome
Location

Chr.3:11007889 on build GRCh38
Cytoband
3p25.3
Assay ID Hs04720313_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6529

Gene Name:

 solute carrier family 6 member 1

Gene Aliases:

 GABATHG, GABATR, GAT1, MAE

Location:

 Chr.3:10992718-11039249 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC6A1 NM_003042.3 NP_003033.3
XM_006713306.3 XP_006713369.1
BC033904.1 AAH33904.1

Target Gene Details

Entrez Gene ID:

 100874090

Gene Name:

 SLC6A1 antisense RNA 1

Gene Aliases:

 -

Location:

 Chr.3:11006098-11019224 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC6A1-AS1 NR_046647.1
DA771774.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion ATP2B2-IT2 ATP2B2 SEC13 ATG7 LOC101927467 FANCD2 LINC00852 FANCD2OS GHRLOS SLC6A1 VHL GHRL IRAK2 MIR885 HRH1 VGLL4 SLC6A11 TATDN2 LINC00606 TAMM41 MIR378B SLC6A1-AS1 BRK1
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion FANCD2P2 LOC101927467 LINC00852 FANCD2OS EMC3 VHL MIR885 TATDN2 CIDECP SLC6A1-AS1 ATP2B2-IT2 ATP2B2 SEC13 LOC401052 ATG7 FANCD2 GHRLOS SLC6A1 GHRL IRAK2 HRH1 VGLL4 SLC6A11 LINC00606 TAMM41 MIR378B BRK1
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion ATP2B2-IT2 ATP2B2 SEC13 ATG7 FANCD2P2 LOC101927467 FANCD2 LINC00852 FANCD2OS GHRLOS SLC6A1 VHL GHRL IRAK2 MIR885 HRH1 VGLL4 SLC6A11 TATDN2 LINC00606 TAMM41 MIR378B SLC6A1-AS1 BRK1
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion ATP2B2-IT2 ATP2B2 SEC13 ATG7 FANCD2P2 LOC101927467 FANCD2 LINC00852 FANCD2OS GHRLOS SLC6A1 VHL GHRL IRAK2 MIR885 HRH1 VGLL4 SLC6A11 TATDN2 LINC00606 TAMM41 MIR378B SLC6A1-AS1 BRK1
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion EMC3-AS1 FANCD2P2 LOC101927467 LINC00852 FANCD2OS EMC3 VHL MIR885 TATDN2 CIDECP SLC6A1-AS1 ATP2B2-IT2 ATP2B2 SEC13 LOC401052 ATG7 FANCD2 GHRLOS SLC6A1 GHRL IRAK2 HRH1 VGLL4 SLC6A11 LINC00606 TAMM41 MIR378B BRK1

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