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Gene Symbol
SLC6A1
Assay Reference Genome
Location

Chr.3:10999212 on build GRCh38
Cytoband
3p25.3
Assay ID Hs04748082_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6529

Gene Name:

 solute carrier family 6 member 1

Gene Aliases:

 GABATHG, GABATR, GAT1, MAE

Location:

 Chr.3:10992718-11039249 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC6A1 NM_003042.3 NP_003033.3
XM_006713306.3 XP_006713369.1
BC033904.1 AAH33904.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion SLC6A1 SLC6A11 VHL ATG7 SEC13 GHRLOS VGLL4 HRH1 IRAK2 ATP2B2-IT2 TAMM41 FANCD2OS SLC6A1-AS1 ATP2B2 BRK1 LOC101927467 TATDN2 MIR885 MIR378B GHRL FANCD2 LINC00606 LINC00852
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion LOC401052 ATG7 SEC13 GHRLOS VGLL4 HRH1 IRAK2 ATP2B2-IT2 SLC6A1-AS1 ATP2B2 EMC3 BRK1 MIR378B FANCD2 LINC00606 LINC00852 SLC6A1 SLC6A11 VHL FANCD2P2 CIDECP TAMM41 FANCD2OS LOC101927467 TATDN2 MIR885 GHRL
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion SLC6A1 SLC6A11 VHL ATG7 SEC13 GHRLOS VGLL4 FANCD2P2 HRH1 IRAK2 ATP2B2-IT2 TAMM41 FANCD2OS SLC6A1-AS1 ATP2B2 BRK1 LOC101927467 TATDN2 MIR885 MIR378B GHRL FANCD2 LINC00606 LINC00852
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion SLC6A1 SLC6A11 VHL ATG7 SEC13 GHRLOS VGLL4 FANCD2P2 HRH1 IRAK2 ATP2B2-IT2 TAMM41 FANCD2OS SLC6A1-AS1 ATP2B2 BRK1 LOC101927467 TATDN2 MIR885 MIR378B GHRL FANCD2 LINC00606 LINC00852
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion LOC401052 ATG7 SEC13 GHRLOS VGLL4 HRH1 EMC3-AS1 IRAK2 ATP2B2-IT2 SLC6A1-AS1 ATP2B2 EMC3 BRK1 MIR378B FANCD2 LINC00606 LINC00852 SLC6A1 SLC6A11 VHL FANCD2P2 CIDECP TAMM41 FANCD2OS LOC101927467 TATDN2 MIR885 GHRL

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