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See other SLC6A1 CNV Assays ›
Gene Symbol
SLC6A1
Assay Reference Genome
Location

Chr.3:11005936 on build GRCh38
Cytoband
3p25.3
Assay ID Hs04756287_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6529

Gene Name:

 solute carrier family 6 member 1

Gene Aliases:

 GABATHG, GABATR, GAT1, MAE

Location:

 Chr.3:10992718-11039249 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC6A1 NM_003042.3 NP_003033.3
XM_006713306.3 XP_006713369.1
BC033904.1 AAH33904.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion VHL FANCD2OS VGLL4 IRAK2 HRH1 MIR378B MIR885 SLC6A1-AS1 FANCD2 ATP2B2-IT2 GHRL TATDN2 LINC00606 SLC6A11 TAMM41 ATG7 SEC13 GHRLOS SLC6A1 LINC00852 ATP2B2 LOC101927467 BRK1
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion FANCD2OS LOC401052 IRAK2 EMC3 HRH1 MIR378B SLC6A1-AS1 TATDN2 LINC00606 SLC6A11 TAMM41 ATG7 SEC13 CIDECP LOC101927467 BRK1 VHL VGLL4 MIR885 FANCD2 ATP2B2-IT2 GHRL FANCD2P2 GHRLOS SLC6A1 LINC00852 ATP2B2
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion VHL FANCD2OS VGLL4 IRAK2 HRH1 MIR378B MIR885 SLC6A1-AS1 FANCD2 ATP2B2-IT2 GHRL TATDN2 LINC00606 FANCD2P2 SLC6A11 TAMM41 ATG7 SEC13 GHRLOS SLC6A1 LINC00852 ATP2B2 LOC101927467 BRK1
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion VHL FANCD2OS VGLL4 IRAK2 HRH1 MIR378B MIR885 SLC6A1-AS1 FANCD2 ATP2B2-IT2 GHRL TATDN2 LINC00606 FANCD2P2 SLC6A11 TAMM41 ATG7 SEC13 GHRLOS SLC6A1 LINC00852 ATP2B2 LOC101927467 BRK1
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion EMC3-AS1 FANCD2OS LOC401052 IRAK2 EMC3 HRH1 MIR378B SLC6A1-AS1 TATDN2 LINC00606 SLC6A11 TAMM41 ATG7 SEC13 CIDECP LOC101927467 BRK1 VHL VGLL4 MIR885 FANCD2 ATP2B2-IT2 GHRL FANCD2P2 GHRLOS SLC6A1 LINC00852 ATP2B2

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