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Gene Symbol
SPON2
Assay Reference Genome
Location

Chr.4:1175850 on build GRCh38
Cytoband
4p16.3
Assay ID Hs04877470_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10417

Gene Name:

 spondin 2

Gene Aliases:

 DIL-1, DIL1, M-SPONDIN, MINDIN

Location:

 Chr.4:1166932-1208962 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPON2 NM_001199021.1 NP_001185950.1
DA087369.1
DA201089.1
DB249869.1
DB254983.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv822425 Chr.4:546316 - 1420011 on Build GRCh38 Loss NKX1-1 MYL5 SPON2 MAEA GAK CRIPAK CTBP1-AS LOC101928548 LOC107986211 TMEM175 MFSD7 LOC100129917 IDUA LOC105374344 DGKQ TMED11P SLC26A1 PDE6B FGFRL1 PCGF3 CTBP1-AS2 RNF212 CTBP1 ATP5I LOC100130872 UVSSA CPLX1 LOC101928521
nsv593278 Chr.4:1165892 - 1421910 on Build GRCh38 Loss CTBP1-AS NKX1-1 CTBP1 LOC100130872 LOC101928548 SPON2 UVSSA MAEA CTBP1-AS2 CRIPAK
nsv950331 Chr.4:1164113 - 1239212 on Build GRCh38 Deletion CTBP1-AS CTBP1 LOC100130872 LOC101928548 SPON2
nsv519106 Chr.4:1165203 - 1181073 on Build GRCh38 Loss SPON2
nsv1012892 Chr.4:1093083 - 1182842 on Build GRCh38 Loss RNF212 LOC105374344 SPON2 TMED11P
nsv829835 Chr.4:1103798 - 1310451 on Build GRCh38 Gain RNF212 CTBP1-AS CTBP1 LOC100130872 LOC101928548 LOC105374344 SPON2 TMED11P MAEA CTBP1-AS2

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More Information


Additional Information:

For this assay, SNP(s) [rs78500739] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

cell adhesion molecule

Gene Ontology Categories:

Function(s) Process(es)


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