Hs05065964_cn

• Gene Symbol: CHRAC1
• Assay Reference Genome Location: Chr.8:140512017 on build GRCh38
• Cytoband: 8q24.3

Target Gene Details

• Entrez Gene ID: 54108
• Gene Name: chromatin accessibility complex 1
• Gene Aliases: CHARC1, CHARC15, CHRAC-1, CHRAC-15, CHRAC15, YCL1
• Location: Chr.8:140511298-140517153 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CHRAC1	NM_017444.5			NP_059140.1
	NR_023360.2
	NR_040712.1
	AF226076.1			AAF72416.1
	AK023537.1			BAB14601.1
	AK308709.1
	AK311595.1
	AL543044.3
	BC015891.1			AAH15891.1
	BU160855.1
	DA647606.1
	DA887467.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2737756	Chr.8:140419230 - 141917755 on Build GRCh38	Deletion	TRAPPC9 MROH5 SLC45A4 PTK2 PTP4A3 LOC107986982 FP248 AGO2 MIR151A DENND3 MIR1302-7 LINC01300 CHRAC1 LOC105375787 GPR20
nsv1016282	Chr.8:140453461 - 140537127 on Build GRCh38	Gain	TRAPPC9 AGO2 CHRAC1
nsv509283	Chr.8:140435015 - 140522401 on Build GRCh38	Insertion	TRAPPC9 AGO2 CHRAC1
esv3619033	Chr.8:140397686 - 140512123 on Build GRCh38	Gain	TRAPPC9 CHRAC1
nsv1126125	Chr.8:140419236 - 141917668 on Build GRCh38	Deletion	TRAPPC9 MROH5 SLC45A4 PTK2 PTP4A3 LOC107986982 FP248 AGO2 MIR151A DENND3 MIR1302-7 LINC01300 CHRAC1 LOC105375787 GPR20
nsv612566	Chr.8:140448395 - 140519958 on Build GRCh38	Loss	TRAPPC9 CHRAC1
dgv12367n54	Chr.8:140431882 - 140524741 on Build GRCh38	Gain	TRAPPC9 AGO2 CHRAC1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

chromatin remodeling
DNA biosynthetic process

Function(s)

DNA binding
DNA-directed DNA polymerase activity
protein binding
protein heterodimerization activity