Genomic Map
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Target Gene Details
Entrez Gene ID: | 825 |
Gene Name: | calpain 3 |
Gene Aliases: |
CANP3, CANPL3, LGMD2, LGMD2A, nCL-1, p94 |
Location: |
Chr.15:42359500-42412317 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CAPN3 | NM_000070.2 | NP_000061.1 | ||
| NM_024344.1 | NP_077320.1 | |||
| NM_173087.1 | NP_775110.1 | |||
| AF127764.1 | AAD28253.1 | |||
| AF127765.3 | AAD28254.3 | |||
| AK308103.1 | ||||
| BC146649.1 | ||||
| BC146672.1 | ||||
| EU791850.1 | ||||
| EU791851.1 | ||||
| X85030.1 | CAA59403.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv832987 | Chr.15:42335249 - 42500150 on Build GRCh38 | Gain |
 CAPN3
GANC
ZNF106
SNAP23
|
| nsv832986 | Chr.15:42295627 - 42461466 on Build GRCh38 | Loss |
CAPN3
GANC
ZNF106
|
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Additional Information:
For this assay, SNP(s) [rs76954407] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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