Hs05357435_cn

• Gene Symbol: LIPC
• Assay Reference Genome Location: Chr.15:58425910 on build GRCh38
• Cytoband: 15q21.3

Target Gene Details

• Entrez Gene ID: 3990
• Gene Name: lipase C, hepatic type
• Gene Aliases: HDLCQ12, HL, HTGL, LIPH
• Location: Chr.15:58410754-58568952 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LIPC	XM_005254372.1			XP_005254429.1
	AK290062.1
	AK292631.1
	BC146659.1

Target Gene Details

• Entrez Gene ID: 101928635
• Gene Name: uncharacterized LOC101928635
• Gene Aliases: -
• Location: Chr.15:58106609-58431770 on Build GRCh38
• Assay Gene Location:

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC101928635

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3892705	Chr.15:58414647 - 58428232 on Build GRCh38	Loss	LIPC LOC101928635
nsv569598	Chr.15:58260407 - 58560264 on Build GRCh38	Loss	LIPC LOC101928635 LIPC-AS1 LOC101928668
nsv1047048	Chr.15:58409201 - 58492601 on Build GRCh38	Loss	LIPC LOC101928635 LIPC-AS1

More Information

Additional Information:

For this assay, SNP(s) [rs144155997] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

lipase

Gene Ontology Categories:

Process(es)

response to hypoxia
liver development
fatty acid biosynthetic process
phosphatidylserine metabolic process
circadian rhythm
cholesterol metabolic process
response to carbohydrate
response to acetate
heparan sulfate proteoglycan biosynthetic process
triglyceride catabolic process
response to nutrient levels
response to magnesium ion
cellular response to hormone stimulus
chylomicron remodeling
very-low-density lipoprotein particle remodeling
intermediate-density lipoprotein particle remodeling
low-density lipoprotein particle remodeling
high-density lipoprotein particle remodeling
chylomicron remnant clearance
low-density lipoprotein particle clearance
phosphatidylcholine catabolic process
response to drug
cholesterol homeostasis
response to amino acid
response to peptide hormone
reverse cholesterol transport
lipid digestion
phosphatidylethanolamine metabolic process
phosphatidic acid metabolic process
glycerophospholipid catabolic process
response to copper ion
developmental growth
protein oligomerization
response to glucocorticoid
response to calcium ion
triglyceride homeostasis
response to fatty acid

Function(s)

phospholipase activity
lysophospholipase activity
triglyceride lipase activity
heparin binding
lipid binding
phosphatidylcholine 1-acylhydrolase activity
transferase activity, transferring acyl groups
low-density lipoprotein particle binding
apolipoprotein binding
heparan sulfate proteoglycan binding
acylglycerol lipase activity