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See other APBA2 CNV Assays ›
Gene Symbol
APBA2
Assay Reference Genome
Location

Chr.15:28954951 on build GRCh38
Cytoband
15q13.1
Assay ID Hs05383261_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 321

Gene Name:

 amyloid beta precursor protein binding family A member 2

Gene Aliases:

 D15S1518E, HsT16821, LIN-10, MGC:14091, MINT2, X11-BETA, X11L

Location:

 Chr.15:28885479-29118315 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
APBA2 NM_001130414.1 NP_001123886.1
NM_005503.3 NP_005494.2
XM_011521488.2 XP_011519790.1
XM_011521489.2 XP_011519791.1
XM_011521490.2 XP_011519792.1
XM_011521493.2 XP_011519795.1
XM_011521494.2 XP_011519796.1
XM_017022101.1 XP_016877590.1
XM_017022102.1 XP_016877591.1
XM_017022103.1 XP_016877592.1
XM_017022104.1 XP_016877593.1
XM_017022105.1 XP_016877594.1
XM_017022106.1 XP_016877595.1
XM_017022107.1 XP_016877596.1
XM_017022108.1 XP_016877597.1
XM_017022109.1 XP_016877598.1
XM_017022110.1 XP_016877599.1
XM_017022111.1 XP_016877600.1
XM_017022113.1 XP_016877602.1
XM_017022114.1 XP_016877603.1
XM_017022115.1 XP_016877604.1
XM_017022117.1 XP_016877606.1
AF047348.1 AAC39767.1
AK310413.1
BC082986.1 AAH82986.1
BX332225.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1040778 Chr.15:28689598 - 30515727 on Build GRCh38 Loss CHRFAM7A APBA2 LOC107984752 LOC100130111 GOLGA8T DKFZP434L187 LOC101060569 LOC100289656 TJP1 NSMCE3 LOC105370746 GOLGA8J LOC105370751 FAM189A1 PDCD6IPP2 ULK4P3 WHAMMP2 GOLGA8M GOLGA6L7P GOLGA8R
nsv527255 Chr.15:28754022 - 30074044 on Build GRCh38 Gain FAM189A1 APBA2 LOC107984752 LOC100130111 PDCD6IPP2 WHAMMP2 GOLGA6L7P LOC100289656 TJP1 NSMCE3
nsv475691 Chr.15:28954969 - 28954969 on Build GRCh38 Novel Sequence Insertion APBA2
esv2751526 Chr.15:28724519 - 30687025 on Build GRCh38 Loss CHRFAM7A LOC107984752 LOC100288637 LOC100996413 GOLGA8T LOC100289656 GOLGA8H TJP1 GOLGA8J PDCD6IPP2 ULK4P3 WHAMMP2 GOLGA6L7P GOLGA8R ULK4P2 APBA2 LOC100130111 ARHGAP11B DKFZP434L187 LOC101060569 LOC101927579 NSMCE3 LOC105370746 LOC105370751 FAM189A1
nsv1039798 Chr.15:28724126 - 30158154 on Build GRCh38 Gain APBA2 LOC107984752 LOC100130111 GOLGA8T LOC100289656 TJP1 NSMCE3 GOLGA8J FAM189A1 PDCD6IPP2 ULK4P3 WHAMMP2 GOLGA6L7P
nsv516384 Chr.15:28920744 - 28996217 on Build GRCh38 Loss APBA2
nsv1038806 Chr.15:28933682 - 28965543 on Build GRCh38 Gain APBA2
nsv568662 Chr.15:27726493 - 29056123 on Build GRCh38 Gain APBA2 LOC107984752 MIR4509-2 LOC645202 LOC100289656 LOC100132202 GOLGA8G HERC2P11 PDCD6IPP2 WHAMMP2 MIR4509-3 GOLGA8F GOLGA8M GOLGA6L7P HERC2P9 OCA2 HERC2 LOC101929047

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More Information


Additional Information:

For this assay, SNP(s) [rs115085960] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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