Hs05476397_cn

• Gene Symbol: SEC14L1
• Assay Reference Genome Location: Chr.17:77088601 on build GRCh38
• Cytoband: 17q25.2

Target Gene Details

• Entrez Gene ID: 6397
• Gene Name: SEC14 like lipid binding 1
• Gene Aliases: PRELID4A, SEC14L
• Location: Chr.17:77088643-77217101 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SEC14L1	NM_001204408.1			NP_001191337.1
	FN357114.1

Target Gene Details

• Entrez Gene ID: 654434
• Gene Name: small nucleolar RNA host gene 20
• Gene Aliases: C17orf86, LINC00338, NCRNA00338, SCARNA16HG
• Location: Chr.17:77088643-77094986 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SNHG20	NR_027058.1
	DA916381.1
	FN357113.1
	FN357115.1
	FN357116.1
	FN357124.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv5784n54	Chr.17:77049144 - 77101828 on Build GRCh38	Gain	SNHG20 SCARNA16 SEC14L1 MIR6516
esv3641304	Chr.17:77065524 - 77180984 on Build GRCh38	Gain	SNHG20 SCARNA16 SEC14L1 MIR6516
esv3582914	Chr.17:77086710 - 77091639 on Build GRCh38	Loss	SNHG20 SCARNA16 SEC14L1 MIR6516

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

choline transport
negative regulation of RIG-I signaling pathway
innate immune response

Function(s)

protein binding
RIG-I binding
molecular function regulator