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See other LOC101927159 CNV Assays ›
Gene Symbol
LOC101927159
Assay Reference Genome
Location

Chr.20:42687362 on build GRCh38
Cytoband
20q12
Assay ID Hs05525153_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927159

Gene Name:

 uncharacterized LOC101927159

Gene Aliases:

 -

Location:

 Chr.20:42685483-42688562 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927159 NR_110004.1 4 795

Target Gene Details

Entrez Gene ID:

 11122

Gene Name:

 protein tyrosine phosphatase, receptor type T

Gene Aliases:

 RPTPrho

Location:

 Chr.20:42072752-43189917 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PTPRT NM_007050.5 NP_008981.4
NM_133170.3 NP_573400.3
XM_017027611.1 XP_016883100.1
XM_017027612.1 XP_016883101.1
XM_017027613.1 XP_016883102.1
AB006621.2
AF043644.4 AAD09421.2
BC153300.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1057847 Chr.20:42652464 - 44431352 on Build GRCh38 Loss HNF4A-AS1 MIR3646 SGK2 JPH2 LOC105372626 L3MBTL1 LOC101927138 GTSF1L TOX2 MYBL2 LOC101927200 OSER1 IFT52 HNF4A OSER1-AS1 GDAP1L1 PTPRT SRSF6 R3HDML FITM2 LOC101927159
esv3893336 Chr.20:42329007 - 43025374 on Build GRCh38 Loss PTPRT LOC101927138 LOC101927159
dgv782e214 Chr.20:42655671 - 42715083 on Build GRCh38 Loss PTPRT LOC101927159
nsv833988 Chr.20:42599148 - 42751281 on Build GRCh38 Loss PTPRT LOC101927159
nsv586028 Chr.20:42668354 - 42752575 on Build GRCh38 Loss PTPRT LOC101927159

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