Hs05560670_cn

• Gene Symbol: CSDC2
• Assay Reference Genome Location: Chr.22:41567569 on build GRCh38
• Cytoband: 22q13.2

Target Gene Details

• Entrez Gene ID: 27254
• Gene Name: cold shock domain containing C2
• Gene Aliases: PIPPIN, dJ347H13.2
• Location: Chr.22:41561010-41576666 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CSDC2	NM_014460.3			NP_055275.1
	AK313407.1
	AL834417.1			CAD39079.2
	DB168570.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv516925	Chr.22:41252498 - 41585953 on Build GRCh38	Loss	LOC100996598 CSDC2 RANGAP1 MIR6889 ACO2 LOC105373044 TOB2 POLR3H TEF PMM1 PHF5A ZC3H7B
nsv1055166	Chr.22:41536399 - 41622240 on Build GRCh38	Gain	CSDC2 DESI1 XRCC6 LOC105373044 POLR3H PMM1
nsv834209	Chr.22:41563516 - 41746056 on Build GRCh38	Loss	CSDC2 DESI1 SNU13 MEI1 XRCC6 C22orf46 PMM1
nsv524585	Chr.22:40993505 - 41794305 on Build GRCh38	Loss	LOC100996598 CSDC2 DESI1 SNU13 MEI1 RANGAP1 MIR6889 L3MBTL2 XRCC6 LOC105373044 TOB2 POLR3H TEF PMM1 PHF5A EP300-AS1 ZC3H7B MIR1281 ACO2 EP300 C22orf46 SNORD140 CHADL

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
mRNA processing

Function(s)

DNA binding
RNA binding
protein binding
transcription factor binding