Hs05565875_cn

• Gene Symbol: CSDC2
• Assay Reference Genome Location: Chr.22:41568845 on build GRCh38
• Cytoband: 22q13.2

Target Gene Details

• Entrez Gene ID: 27254
• Gene Name: cold shock domain containing C2
• Gene Aliases: PIPPIN, dJ347H13.2
• Location: Chr.22:41561010-41576666 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CSDC2	NM_014460.3			NP_055275.1
	AK313407.1
	AL834417.1			CAD39079.2
	DB168570.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv516925	Chr.22:41252498 - 41585953 on Build GRCh38	Loss	POLR3H LOC105373044 PHF5A ACO2 ZC3H7B TOB2 CSDC2 TEF MIR6889 RANGAP1 LOC100996598 PMM1
nsv1055166	Chr.22:41536399 - 41622240 on Build GRCh38	Gain	POLR3H LOC105373044 DESI1 CSDC2 XRCC6 PMM1
nsv834209	Chr.22:41563516 - 41746056 on Build GRCh38	Loss	DESI1 CSDC2 XRCC6 C22orf46 MEI1 PMM1 SNU13
nsv524585	Chr.22:40993505 - 41794305 on Build GRCh38	Loss	PHF5A DESI1 TOB2 SNORD140 TEF XRCC6 LOC100996598 POLR3H LOC105373044 CHADL EP300 ACO2 L3MBTL2 ZC3H7B MIR1281 CSDC2 C22orf46 MIR6889 RANGAP1 MEI1 PMM1 EP300-AS1 SNU13

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
mRNA processing

Function(s)

DNA binding
RNA binding
protein binding
transcription factor binding