Hs05583878_cn

• Gene Symbol: CSDC2
• Assay Reference Genome Location: Chr.22:41571758 on build GRCh38
• Cytoband: 22q13.2

Target Gene Details

• Entrez Gene ID: 27254
• Gene Name: cold shock domain containing C2
• Gene Aliases: PIPPIN, dJ347H13.2
• Location: Chr.22:41561010-41576666 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CSDC2	NM_014460.3			NP_055275.1
	AK313407.1
	AL834417.1			CAD39079.2
	DB168570.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv516925	Chr.22:41252498 - 41585953 on Build GRCh38	Loss	MIR6889 RANGAP1 TOB2 PMM1 CSDC2 TEF LOC100996598 POLR3H PHF5A ZC3H7B ACO2 LOC105373044
nsv1055166	Chr.22:41536399 - 41622240 on Build GRCh38	Gain	PMM1 XRCC6 CSDC2 POLR3H DESI1 LOC105373044
nsv834209	Chr.22:41563516 - 41746056 on Build GRCh38	Loss	C22orf46 MEI1 PMM1 XRCC6 CSDC2 DESI1 SNU13
nsv524585	Chr.22:40993505 - 41794305 on Build GRCh38	Loss	MIR1281 MEI1 TOB2 PMM1 TEF PHF5A SNORD140 ZC3H7B MIR6889 CHADL RANGAP1 C22orf46 XRCC6 CSDC2 LOC100996598 POLR3H EP300-AS1 L3MBTL2 DESI1 ACO2 SNU13 EP300 LOC105373044

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
mRNA processing

Function(s)

DNA binding
RNA binding
protein binding
transcription factor binding