Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 1116 |
Gene Name: | chitinase 3 like 1 |
Gene Aliases: |
ASRT7, CGP-39, GP-39, GP39, HC-gp39, HCGP-3P, YKL-40, YKL40, YYL-40, hCGP-39 |
Location: |
Chr.1:203178931-203186794 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CHI3L1 | NM_001276.2 | NP_001267.2 | ||
| AB209459.1 | 1 | 296 | BAD92696.1 | |
| AK130142.1 | ||||
| AK130200.1 | ||||
| AK225266.1 | ||||
| AK225584.1 | ||||
| AK312911.1 | ||||
| BC008568.1 | AAH08568.1 | |||
| BC038354.1 | AAH38354.1 | |||
| BC039132.1 | AAH39132.1 | |||
| BT007223.1 | AAP35887.1 | |||
| DA167112.1 | ||||
| M80927.1 | AAA16074.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv952639 | Chr.1:203164873 - 203186672 on Build GRCh38 | Deletion |
 ADORA1
CHI3L1
MYBPH
|
| nsv832370 | Chr.1:202997191 - 203196105 on Build GRCh38 | Loss |
MYOG
PPFIA4
ADORA1
CHI3L1
LOC100506747
MYBPH
TMEM183A
|
Back To TopMore Information
Additional Information:
For this assay, SNP(s) [rs75125014] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
Back To Top