Hs05870867_cn

• Gene Symbol: GALNT13
• Assay Reference Genome Location: Chr.2:154445767 on build GRCh38
• Cytoband: 2q24.1

Target Gene Details

• Entrez Gene ID: 114805
• Gene Name: polypeptide N-acetylgalactosaminyltransferase 13
• Gene Aliases: GalNAc-T13
• Location: Chr.2:153871898-154454177 on Build GRCh38
• Assay Gene Location: Within Intron 14

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GALNT13	NM_001301627.1			NP_001288556.1
	NM_052917.3			NP_443149.2
	XM_011510537.2			XP_011508839.1
	XM_011510538.2			XP_011508840.1
	XM_017003258.1			XP_016858747.1
	XM_017003259.1			XP_016858748.1
	XM_017003260.1			XP_016858749.1
	XM_017003261.1			XP_016858750.1
	XM_017003262.1			XP_016858751.1
	XM_017003263.1			XP_016858752.1
	AB067505.1			BAB67811.1
	AB078142.1			BAC54545.1
	AJ505991.2			CAD44533.2
	AK131195.1
	BC101031.1			AAI01032.1
	BC101032.2
	BC101033.1			AAI01034.1
	BC101034.2
	BG221433.1
	KJ534843.1
	KJ535058.1

Target Gene Details

• Entrez Gene ID: 100144595
• Gene Name: uncharacterized LOC100144595
• Gene Aliases: -
• Location: Chr.2:154435853-154457438 on Build GRCh38
• Assay Gene Location: Overlaps Intron 4 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC100144595	NM_001256368.1			NP_001243297.1
	AK090913.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv583422	Chr.2:154406489 - 154475974 on Build GRCh38	Loss	GALNT13 LOC100144595
nsv583421	Chr.2:154401008 - 154524026 on Build GRCh38	Loss	GALNT13 LOC100144595
esv3592991	Chr.2:154445647 - 154453382 on Build GRCh38	Gain	GALNT13 LOC100144595

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)

O-glycan processing

Function(s)

polypeptide N-acetylgalactosaminyltransferase activity
carbohydrate binding
metal ion binding