Hs05896559_cn

• Gene Symbol: GPD1L
• Assay Reference Genome Location: Chr.3:32132992 on build GRCh38
• Cytoband: 3p22.3

Target Gene Details

• Entrez Gene ID: 23171
• Gene Name: glycerol-3-phosphate dehydrogenase 1-like
• Gene Aliases: GPD1-L
• Location: Chr.3:32106511-32168715 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GPD1L	NM_015141.3			NP_055956.1
	XM_006713068.2			XP_006713131.1
	AK292808.1
	BC028726.2			AAH28726.1
	D42047.1
	DA318838.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1003285	Chr.3:31386933 - 33172886 on Build GRCh38	Gain	SUSD5 CRTAP GLB1 CCR4 DYNC1LI1 TRIM71 OSBPL10 LOC105377022 TMPPE CMTM8 GPD1L CMTM6 LOC105377021 OSBPL10-AS1 CNOT10 MIR548AY CMTM7 ZNF860 STT3B
nsv1011573	Chr.3:31860029 - 32251734 on Build GRCh38	Gain	OSBPL10 ZNF860 CMTM8 GPD1L
nsv3751	Chr.3:32088214 - 32133605 on Build GRCh38	Deletion	GPD1L
nsv1003110	Chr.3:32101304 - 32140890 on Build GRCh38	Gain	GPD1L

More Information

Additional Information:

For this assay, SNP(s) [rs73824550,rs74720918] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Process(es)

regulation of heart rate
carbohydrate metabolic process
phosphatidic acid biosynthetic process
NADH metabolic process
positive regulation of sodium ion transport
triglyceride biosynthetic process
NAD metabolic process
negative regulation of peptidyl-serine phosphorylation
glycerol-3-phosphate catabolic process
oxidation-reduction process
regulation of ventricular cardiac muscle cell membrane depolarization
ventricular cardiac muscle cell action potential
negative regulation of protein kinase C signaling
positive regulation of protein localization to cell surface
regulation of sodium ion transmembrane transporter activity

Function(s)

glycerol-3-phosphate dehydrogenase [NAD+] activity
sodium channel regulator activity
protein homodimerization activity
ion channel binding
NAD binding