Name: [Hs06134598_cn] [GCNT2]
Creator: Thermo Fisher Scientific
Keywords: [GCNT2] Assay, [glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	2651
Gene Name:	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
Gene Aliases:	CCAT, CTRCT13, GCNT2C, GCNT5, IGNT, II, NACGT1, NAGCT1, ULG3, bA360O19.2, bA421M1.1
Location:	Chr.6:10521283-10629368 on Build GRCh38
Assay Gene Location:	Within Intron 8

Gene Symbol	Transcript Accession	Protein ID
GCNT2	NM_001491.2	NP_001482.1
	NM_145649.4	NP_663624.1
	NM_145655.3	NP_663630.2
	XM_005248999.2	XP_005249056.1
	XM_006715052.3	XP_006715115.1
	XM_011514466.2	XP_011512768.1
	AB078432.1	BAC66781.1
	AB078433.1	BAC66782.1
	AF401652.1	AAL50561.1
	AF401653.1	AAL50562.1
	AF458024.1	AAM73864.1
	AF458025.1	AAM73865.1
	AF458026.1	AAM73866.1
	AF458027.1	AAM73867.1
	AF458028.1	AAM74524.1
	AF458029.1	AAM73869.1
	AF458030.1	AAM73870.1
	AK090483.1	BAC03464.1
	AK098105.1	BAC05234.1
	AK291195.1
	AK291767.1
	AK307329.1
	AK307337.1
	AK307373.1
	AK313426.1
	AK313903.1
	AL832714.1
	AL832719.1
	AY435145.1	AAR95646.1
	AY435146.1	AAR95647.1
	AY435147.1	AAR95648.1
	BC074801.2	AAH74801.1
	BC074802.2	AAH74802.1
	BC130524.1
	BX647576.1	CAI46081.1
	BX647668.1
	L19659.1	AAA81777.1
	Z19550.1	CAA79610.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv600988	Chr.6:10501021 - 10614845 on Build GRCh38	Loss	GCNT2
nsv966670	Chr.6:10447438 - 10871656 on Build GRCh38	Duplication	C6orf52 MAK MIR5689HG PAK1IP1 TMEM14B LOC101928106 GCNT2 TMEM14C
nsv462631	Chr.6:10449025 - 10839526 on Build GRCh38	Gain	C6orf52 MAK MIR5689HG PAK1IP1 TMEM14B LOC101928106 GCNT2 TMEM14C
nsv470800	Chr.6:10538711 - 10863092 on Build GRCh38	Gain	C6orf52 MAK PAK1IP1 TMEM14B GCNT2 TMEM14C
esv2759406	Chr.6:10443564 - 10642899 on Build GRCh38	Loss	MIR5689HG LOC101928106 GCNT2