Hs06246124_cn

• Gene Symbol: PXDNL
• Assay Reference Genome Location: Chr.8:51371083 on build GRCh38
• Cytoband: 8q11.22

Target Gene Details

• Entrez Gene ID: 137902
• Gene Name: peroxidasin like
• Gene Aliases: PMR1, PRM1, VPO2
• Location: Chr.8:51319575-51811031 on Build GRCh38
• Assay Gene Location: Within Intron 22

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PXDNL	NM_144651.4			NP_653252.3
	XM_005251168.3			XP_005251225.1
	XM_006716420.3			XP_006716483.1
	XM_011517456.2			XP_011515758.1
	XM_011517457.2			XP_011515759.1
	XM_011517458.2			XP_011515760.1
	XM_017013041.1			XP_016868530.1
	AK058200.1			BAB71713.1
	AK131524.1			BAD18663.1
	AY877349.1
	EU170240.1
	KJ545488.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv817615	Chr.8:51339845 - 52110824 on Build GRCh38	Gain	LOC102724330 PXDNL PCMTD1

More Information

Additional Information:

For this assay, SNP(s) [rs116259444,rs75077202] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

peroxidase

Gene Ontology Categories:

Process(es)

response to oxidative stress
hydrogen peroxide catabolic process
oxidation-reduction process
nucleic acid phosphodiester bond hydrolysis
cellular oxidant detoxification

Function(s)

endonuclease activity
peroxidase activity
heme binding
metal ion binding