Genomic Map
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Target Gene Details
Entrez Gene ID: | 5682 |
Gene Name: | proteasome subunit alpha 1 |
Gene Aliases: |
HC2, HEL-S-275, NU, PROS30 |
Location: |
Chr.11:14504876-14643634 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PSMA1 | NM_148976.2 | NP_683877.1 | ||
| FJ224300.1 | ||||
| M64992.1 | AAA92734.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1048243 | Chr.11:14498179 - 14790901 on Build GRCh38 | Gain |
 PSMA1
PDE3B
COPB1
|
| esv3625424 | Chr.11:14540139 - 14591071 on Build GRCh38 | Loss |
PSMA1
|
| nsv7685 | Chr.11:14531333 - 14563740 on Build GRCh38 | Insertion |
PSMA1
|
| esv3625423 | Chr.11:14498858 - 14549991 on Build GRCh38 | Loss |
PSMA1
COPB1
|
| esv3578250 | Chr.11:14350967 - 14976647 on Build GRCh38 | Gain |
CYP2R1
PSMA1
PDE3B
COPB1
LOC107984314
RRAS2
CALCA
|
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Additional Information:
For this assay, SNP(s) [rs115665899] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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